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C2orf81 (chromosome 2 open reading frame 81)

Identity

Alias_symbol (synonym)LOC388963
hCG40743
Other alias
HGNC (Hugo) C2orf81
LocusID (NCBI) 388963
Atlas_Id 61169
Location 2p13.1  [Link to chromosome band 2p13]
Location_base_pair Starts at 74641303 and ends at 74644844 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C2orf81   34350
Cards
Entrez_Gene (NCBI)C2orf81  388963  chromosome 2 open reading frame 81
AliaseshCG40743
GeneCards (Weizmann)C2orf81
Ensembl hg19 (Hinxton)ENSG00000159239 [Gene_View]  chr2:74641303-74644844 [Contig_View]  C2orf81 [Vega]
Ensembl hg38 (Hinxton)ENSG00000159239 [Gene_View]  chr2:74641303-74644844 [Contig_View]  C2orf81 [Vega]
ICGC DataPortalENSG00000159239
TCGA cBioPortalC2orf81
AceView (NCBI)C2orf81
Genatlas (Paris)C2orf81
WikiGenes388963
SOURCE (Princeton)C2orf81
Genetics Home Reference (NIH)C2orf81
Genomic and cartography
GoldenPath hg19 (UCSC)C2orf81  -     chr2:74641303-74644844 -  2p13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C2orf81  -     2p13.1   [Description]    (hg38-Dec_2013)
EnsemblC2orf81 - 2p13.1 [CytoView hg19]  C2orf81 - 2p13.1 [CytoView hg38]
Mapping of homologs : NCBIC2orf81 [Mapview hg19]  C2orf81 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM045416 BX102034
RefSeq transcript (Entrez)NM_001145054
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)C2orf81
Cluster EST : UnigeneHs.445377 [ NCBI ]
CGAP (NCI)Hs.445377
Alternative Splicing GalleryENSG00000159239
Gene ExpressionC2orf81 [ NCBI-GEO ]   C2orf81 [ EBI - ARRAY_EXPRESS ]   C2orf81 [ SEEK ]   C2orf81 [ MEM ]
Gene Expression Viewer (FireBrowse)C2orf81 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388963
GTEX Portal (Tissue expression)C2orf81
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NN90   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NN90  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NN90
Splice isoforms : SwissVarA6NN90
PhosPhoSitePlusA6NN90
Domains : Interpro (EBI)DUF4639   
Domain families : Pfam (Sanger)DUF4639 (PF15479)   
Domain families : Pfam (NCBI)pfam15479   
Conserved Domain (NCBI)C2orf81
DMDM Disease mutations388963
Blocks (Seattle)C2orf81
SuperfamilyA6NN90
Human Protein AtlasENSG00000159239
Peptide AtlasA6NN90
IPIIPI00920959   IPI00985252   IPI00973747   IPI00974030   
Protein Interaction databases
DIP (DOE-UCLA)A6NN90
IntAct (EBI)A6NN90
FunCoupENSG00000159239
BioGRIDC2orf81
STRING (EMBL)C2orf81
ZODIACC2orf81
Ontologies - Pathways
QuickGOA6NN90
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC2orf81
Atlas of Cancer Signalling NetworkC2orf81
Wikipedia pathwaysC2orf81
Orthology - Evolution
OrthoDB388963
GeneTree (enSembl)ENSG00000159239
Phylogenetic Trees/Animal Genes : TreeFamC2orf81
HOVERGENA6NN90
HOGENOMA6NN90
Homologs : HomoloGeneC2orf81
Homology/Alignments : Family Browser (UCSC)C2orf81
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC2orf81 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C2orf81
dbVarC2orf81
ClinVarC2orf81
1000_GenomesC2orf81 
Exome Variant ServerC2orf81
ExAC (Exome Aggregation Consortium)C2orf81 (select the gene name)
Genetic variants : HAPMAP388963
Genomic Variants (DGV)C2orf81 [DGVbeta]
DECIPHER (Syndromes)2:74641303-74644844  ENSG00000159239
CONAN: Copy Number AnalysisC2orf81 
Mutations
ICGC Data PortalC2orf81 
TCGA Data PortalC2orf81 
Broad Tumor PortalC2orf81
OASIS PortalC2orf81 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC2orf81  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC2orf81
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C2orf81
DgiDB (Drug Gene Interaction Database)C2orf81
DoCM (Curated mutations)C2orf81 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C2orf81 (select a term)
intoGenC2orf81
Cancer3DC2orf81(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC2orf81
Genetic Testing Registry C2orf81
NextProtA6NN90 [Medical]
TSGene388963
GENETestsC2orf81
Huge Navigator C2orf81 [HugePedia]
snp3D : Map Gene to Disease388963
BioCentury BCIQC2orf81
ClinGenC2orf81
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388963
Chemical/Pharm GKB GenePA162379643
Clinical trialC2orf81
Miscellaneous
canSAR (ICR)C2orf81 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC2orf81
EVEXC2orf81
GoPubMedC2orf81
iHOPC2orf81
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:57:17 CET 2017

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