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C2orf82 (chromosome 2 open reading frame 82)

Identity

Alias_symbol (synonym)UNQ830
ASCL830
Other alias
HGNC (Hugo) C2orf82
LocusID (NCBI) 389084
Atlas_Id 61170
Location 2q37.1  [Link to chromosome band 2q37]
Location_base_pair Starts at 232869632 and ends at 232878704 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C2orf82   33763
Cards
Entrez_Gene (NCBI)C2orf82  389084  chromosome 2 open reading frame 82
AliasesASCL830; UNQ830
GeneCards (Weizmann)C2orf82
Ensembl hg19 (Hinxton)ENSG00000182600 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182600 [Gene_View]  chr2:232869632-232878704 [Contig_View]  C2orf82 [Vega]
ICGC DataPortalENSG00000182600
TCGA cBioPortalC2orf82
AceView (NCBI)C2orf82
Genatlas (Paris)C2orf82
WikiGenes389084
SOURCE (Princeton)C2orf82
Genetics Home Reference (NIH)C2orf82
Genomic and cartography
GoldenPath hg38 (UCSC)C2orf82  -     chr2:232869632-232878704 +  2q37.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C2orf82  -     2q37.1   [Description]    (hg19-Feb_2009)
EnsemblC2orf82 - 2q37.1 [CytoView hg19]  C2orf82 - 2q37.1 [CytoView hg38]
Mapping of homologs : NCBIC2orf82 [Mapview hg19]  C2orf82 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026304 AY358535 BC035093 BC049848 BC130307
RefSeq transcript (Entrez)NM_001346120 NM_001346121 NM_001346122 NM_206895
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C2orf82
Cluster EST : UnigeneHs.657509 [ NCBI ]
CGAP (NCI)Hs.657509
Alternative Splicing GalleryENSG00000182600
Gene ExpressionC2orf82 [ NCBI-GEO ]   C2orf82 [ EBI - ARRAY_EXPRESS ]   C2orf82 [ SEEK ]   C2orf82 [ MEM ]
Gene Expression Viewer (FireBrowse)C2orf82 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)389084
GTEX Portal (Tissue expression)C2orf82
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UX34   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UX34  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UX34
Splice isoforms : SwissVarQ6UX34
PhosPhoSitePlusQ6UX34
Domains : Interpro (EBI)DUF4690   
Domain families : Pfam (Sanger)DUF4690 (PF15756)   
Domain families : Pfam (NCBI)pfam15756   
Conserved Domain (NCBI)C2orf82
DMDM Disease mutations389084
Blocks (Seattle)C2orf82
SuperfamilyQ6UX34
Human Protein AtlasENSG00000182600
Peptide AtlasQ6UX34
HPRD15620
IPIIPI00374201   IPI00978846   IPI00916710   IPI00916443   
Protein Interaction databases
DIP (DOE-UCLA)Q6UX34
IntAct (EBI)Q6UX34
FunCoupENSG00000182600
BioGRIDC2orf82
STRING (EMBL)C2orf82
ZODIACC2orf82
Ontologies - Pathways
QuickGOQ6UX34
Ontology : AmiGOintegral component of membrane  cell periphery  
Ontology : EGO-EBIintegral component of membrane  cell periphery  
NDEx NetworkC2orf82
Atlas of Cancer Signalling NetworkC2orf82
Wikipedia pathwaysC2orf82
Orthology - Evolution
OrthoDB389084
GeneTree (enSembl)ENSG00000182600
Phylogenetic Trees/Animal Genes : TreeFamC2orf82
HOVERGENQ6UX34
HOGENOMQ6UX34
Homologs : HomoloGeneC2orf82
Homology/Alignments : Family Browser (UCSC)C2orf82
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC2orf82 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C2orf82
dbVarC2orf82
ClinVarC2orf82
1000_GenomesC2orf82 
Exome Variant ServerC2orf82
ExAC (Exome Aggregation Consortium)C2orf82 (select the gene name)
Genetic variants : HAPMAP389084
Genomic Variants (DGV)C2orf82 [DGVbeta]
DECIPHERC2orf82 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC2orf82 
Mutations
ICGC Data PortalC2orf82 
TCGA Data PortalC2orf82 
Broad Tumor PortalC2orf82
OASIS PortalC2orf82 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC2orf82  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC2orf82
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C2orf82
DgiDB (Drug Gene Interaction Database)C2orf82
DoCM (Curated mutations)C2orf82 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C2orf82 (select a term)
intoGenC2orf82
Cancer3DC2orf82(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC2orf82
Genetic Testing Registry C2orf82
NextProtQ6UX34 [Medical]
TSGene389084
GENETestsC2orf82
Target ValidationC2orf82
Huge Navigator C2orf82 [HugePedia]
snp3D : Map Gene to Disease389084
BioCentury BCIQC2orf82
ClinGenC2orf82
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389084
Chemical/Pharm GKB GenePA162379659
Clinical trialC2orf82
Miscellaneous
canSAR (ICR)C2orf82 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC2orf82
EVEXC2orf82
GoPubMedC2orf82
iHOPC2orf82
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:41:12 CEST 2017

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