Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C2orf91 (chromosome 2 open reading frame 91)

Identity

Other alias-
HGNC (Hugo) C2orf91
LocusID (NCBI) 400950
Atlas_Id 61173
Location 2p21  [Link to chromosome band 2p21]
Location_base_pair Starts at 41935368 and ends at 41953803 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C2orf91   42966
Cards
Entrez_Gene (NCBI)C2orf91  400950  chromosome 2 open reading frame 91
Aliases
GeneCards (Weizmann)C2orf91
Ensembl hg19 (Hinxton)ENSG00000205086 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205086 [Gene_View]  chr2:41935368-41953803 [Contig_View]  C2orf91 [Vega]
ICGC DataPortalENSG00000205086
TCGA cBioPortalC2orf91
AceView (NCBI)C2orf91
Genatlas (Paris)C2orf91
WikiGenes400950
SOURCE (Princeton)C2orf91
Genetics Home Reference (NIH)C2orf91
Genomic and cartography
GoldenPath hg38 (UCSC)C2orf91  -     chr2:41935368-41953803 -  2p21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C2orf91  -     2p21   [Description]    (hg19-Feb_2009)
EnsemblC2orf91 - 2p21 [CytoView hg19]  C2orf91 - 2p21 [CytoView hg38]
Mapping of homologs : NCBIC2orf91 [Mapview hg19]  C2orf91 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124893
RefSeq transcript (Entrez)NM_001242815
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C2orf91
Cluster EST : UnigeneHs.738713 [ NCBI ]
CGAP (NCI)Hs.738713
Alternative Splicing GalleryENSG00000205086
Gene ExpressionC2orf91 [ NCBI-GEO ]   C2orf91 [ EBI - ARRAY_EXPRESS ]   C2orf91 [ SEEK ]   C2orf91 [ MEM ]
Gene Expression Viewer (FireBrowse)C2orf91 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400950
GTEX Portal (Tissue expression)C2orf91
Human Protein AtlasENSG00000205086-C2orf91 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZV80   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZV80  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZV80
Splice isoforms : SwissVarQ6ZV80
PhosPhoSitePlusQ6ZV80
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C2orf91
DMDM Disease mutations400950
Blocks (Seattle)C2orf91
SuperfamilyQ6ZV80
Human Protein Atlas [tissue]ENSG00000205086-C2orf91 [tissue]
Peptide AtlasQ6ZV80
IPIIPI00893982   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZV80
IntAct (EBI)Q6ZV80
FunCoupENSG00000205086
BioGRIDC2orf91
STRING (EMBL)C2orf91
ZODIACC2orf91
Ontologies - Pathways
QuickGOQ6ZV80
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC2orf91
Atlas of Cancer Signalling NetworkC2orf91
Wikipedia pathwaysC2orf91
Orthology - Evolution
OrthoDB400950
GeneTree (enSembl)ENSG00000205086
Phylogenetic Trees/Animal Genes : TreeFamC2orf91
HOVERGENQ6ZV80
HOGENOMQ6ZV80
Homologs : HomoloGeneC2orf91
Homology/Alignments : Family Browser (UCSC)C2orf91
Gene fusions - Rearrangements
Fusion: Tumor Portal C2orf91
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC2orf91 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C2orf91
dbVarC2orf91
ClinVarC2orf91
1000_GenomesC2orf91 
Exome Variant ServerC2orf91
ExAC (Exome Aggregation Consortium)ENSG00000205086
GNOMAD BrowserENSG00000205086
Genetic variants : HAPMAP400950
Genomic Variants (DGV)C2orf91 [DGVbeta]
DECIPHERC2orf91 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC2orf91 
Mutations
ICGC Data PortalC2orf91 
TCGA Data PortalC2orf91 
Broad Tumor PortalC2orf91
OASIS PortalC2orf91 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDC2orf91
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C2orf91
DgiDB (Drug Gene Interaction Database)C2orf91
DoCM (Curated mutations)C2orf91 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C2orf91 (select a term)
intoGenC2orf91
Cancer3DC2orf91(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC2orf91
Genetic Testing Registry C2orf91
NextProtQ6ZV80 [Medical]
TSGene400950
GENETestsC2orf91
Target ValidationC2orf91
Huge Navigator C2orf91 [HugePedia]
snp3D : Map Gene to Disease400950
BioCentury BCIQC2orf91
ClinGenC2orf91
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400950
Chemical/Pharm GKB GenePA166049092
Clinical trialC2orf91
Miscellaneous
canSAR (ICR)C2orf91 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineC2orf91
EVEXC2orf91
GoPubMedC2orf91
iHOPC2orf91
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:40:29 CET 2017

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