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C2orf92 (chromosome 2 open reading frame 92)

Identity

Alias_namesLINC01125
long intergenic non-protein coding RNA 1125
chromosome 2 open reading frame tmp707110
Other alias
HGNC (Hugo) C2orf92
LocusID (NCBI) 728537
Atlas_Id 78832
Location 2q11.2  [Link to chromosome band 2q11]
Location_base_pair Starts at 97669743 and ends at 97703066 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)C2orf92   49272
Cards
Entrez_Gene (NCBI)C2orf92  728537  chromosome 2 open reading frame 92
AliasesLINC01125
GeneCards (Weizmann)C2orf92
Ensembl hg19 (Hinxton)ENSG00000228486 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228486 [Gene_View]  chr2:97669743-97703066 [Contig_View]  C2orf92 [Vega]
ICGC DataPortalENSG00000228486
TCGA cBioPortalC2orf92
AceView (NCBI)C2orf92
Genatlas (Paris)C2orf92
WikiGenes728537
SOURCE (Princeton)C2orf92
Genetics Home Reference (NIH)C2orf92
Genomic and cartography
GoldenPath hg38 (UCSC)C2orf92  -     chr2:97669743-97703066 +  2q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C2orf92  -     2q11.2   [Description]    (hg19-Feb_2009)
EnsemblC2orf92 - 2q11.2 [CytoView hg19]  C2orf92 - 2q11.2 [CytoView hg38]
Mapping of homologs : NCBIC2orf92 [Mapview hg19]  C2orf92 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA448462 AI637498 BC039374 CA314342 DB066031
RefSeq transcript (Entrez)NM_001351368
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C2orf92
Cluster EST : UnigeneHs.469369 [ NCBI ]
CGAP (NCI)Hs.469369
Alternative Splicing GalleryENSG00000228486
Gene ExpressionC2orf92 [ NCBI-GEO ]   C2orf92 [ EBI - ARRAY_EXPRESS ]   C2orf92 [ SEEK ]   C2orf92 [ MEM ]
Gene Expression Viewer (FireBrowse)C2orf92 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728537
GTEX Portal (Tissue expression)C2orf92
Human Protein AtlasENSG00000228486-C2orf92 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C2orf92
DMDM Disease mutations728537
Blocks (Seattle)C2orf92
Human Protein Atlas [tissue]ENSG00000228486-C2orf92 [tissue]
Protein Interaction databases
FunCoupENSG00000228486
BioGRIDC2orf92
STRING (EMBL)C2orf92
ZODIACC2orf92
Ontologies - Pathways
Huge Navigator C2orf92 [HugePedia]
snp3D : Map Gene to Disease728537
BioCentury BCIQC2orf92
ClinGenC2orf92
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728537
Clinical trialC2orf92
Miscellaneous
canSAR (ICR)C2orf92 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC2orf92
EVEXC2orf92
GoPubMedC2orf92
iHOPC2orf92
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:04:04 CET 2017

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