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C3P1 (complement component 3 precursor pseudogene)

Identity

Alias_symbol (synonym)CPLP
Other alias
HGNC (Hugo) C3P1
LocusID (NCBI) 388503
Atlas_Id 61191
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 10042483 and ends at 10074135 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C3P1   34414
Cards
Entrez_Gene (NCBI)C3P1  388503  complement component 3 precursor pseudogene
AliasesCPLP
GeneCards (Weizmann)C3P1
Ensembl hg19 (Hinxton)ENSG00000167798 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167798 [Gene_View]  chr19:10042483-10074135 [Contig_View]  C3P1 [Vega]
ICGC DataPortalENSG00000167798
TCGA cBioPortalC3P1
AceView (NCBI)C3P1
Genatlas (Paris)C3P1
WikiGenes388503
SOURCE (Princeton)C3P1
Genetics Home Reference (NIH)C3P1
Genomic and cartography
GoldenPath hg38 (UCSC)C3P1  -     chr19:10042483-10074135 +  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C3P1  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblC3P1 - 19p13.2 [CytoView hg19]  C3P1 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIC3P1 [Mapview hg19]  C3P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK131489 AW827199 CB162385 DT932550
RefSeq transcript (Entrez)NM_001013640
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C3P1
Cluster EST : UnigeneHs.655363 [ NCBI ]
CGAP (NCI)Hs.655363
Alternative Splicing GalleryENSG00000167798
Gene ExpressionC3P1 [ NCBI-GEO ]   C3P1 [ EBI - ARRAY_EXPRESS ]   C3P1 [ SEEK ]   C3P1 [ MEM ]
Gene Expression Viewer (FireBrowse)C3P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388503
GTEX Portal (Tissue expression)C3P1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZMU1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZMU1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZMU1
Splice isoforms : SwissVarQ6ZMU1
PhosPhoSitePlusQ6ZMU1
Domains : Interpro (EBI)A2M_comp    Macroglobln_a2    Terpenoid_cyclase/PrenylTrfase   
Domain families : Pfam (Sanger)A2M (PF00207)    A2M_comp (PF07678)   
Domain families : Pfam (NCBI)pfam00207    pfam07678   
Domain families : Smart (EMBL)A2M (SM01360)  
Conserved Domain (NCBI)C3P1
DMDM Disease mutations388503
Blocks (Seattle)C3P1
SuperfamilyQ6ZMU1
Human Protein AtlasENSG00000167798
Peptide AtlasQ6ZMU1
HPRD18382
IPIIPI00418572   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZMU1
IntAct (EBI)Q6ZMU1
FunCoupENSG00000167798
BioGRIDC3P1
STRING (EMBL)C3P1
ZODIACC3P1
Ontologies - Pathways
QuickGOQ6ZMU1
Ontology : AmiGOendopeptidase inhibitor activity  extracellular space  negative regulation of endopeptidase activity  
Ontology : EGO-EBIendopeptidase inhibitor activity  extracellular space  negative regulation of endopeptidase activity  
NDEx NetworkC3P1
Atlas of Cancer Signalling NetworkC3P1
Wikipedia pathwaysC3P1
Orthology - Evolution
OrthoDB388503
GeneTree (enSembl)ENSG00000167798
Phylogenetic Trees/Animal Genes : TreeFamC3P1
HOVERGENQ6ZMU1
HOGENOMQ6ZMU1
Homologs : HomoloGeneC3P1
Homology/Alignments : Family Browser (UCSC)C3P1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC3P1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C3P1
dbVarC3P1
ClinVarC3P1
1000_GenomesC3P1 
Exome Variant ServerC3P1
ExAC (Exome Aggregation Consortium)C3P1 (select the gene name)
Genetic variants : HAPMAP388503
Genomic Variants (DGV)C3P1 [DGVbeta]
DECIPHERC3P1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC3P1 
Mutations
ICGC Data PortalC3P1 
TCGA Data PortalC3P1 
Broad Tumor PortalC3P1
OASIS PortalC3P1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC3P1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC3P1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C3P1
DgiDB (Drug Gene Interaction Database)C3P1
DoCM (Curated mutations)C3P1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C3P1 (select a term)
intoGenC3P1
Cancer3DC3P1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC3P1
Genetic Testing Registry C3P1
NextProtQ6ZMU1 [Medical]
TSGene388503
GENETestsC3P1
Target ValidationC3P1
Huge Navigator C3P1 [HugePedia]
snp3D : Map Gene to Disease388503
BioCentury BCIQC3P1
ClinGenC3P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388503
Clinical trialC3P1
Miscellaneous
canSAR (ICR)C3P1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC3P1
EVEXC3P1
GoPubMedC3P1
iHOPC3P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:03:20 CEST 2017

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