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C3orf85 (chromosome 3 open reading frame 85)

Identity

Alias_symbol (synonym)FLJ22763
Other alias-
HGNC (Hugo) C3orf85
LocusID (NCBI) 401081
Atlas_Id 78911
Location 3q13.13  [Link to chromosome band 3q13]
Location_base_pair Starts at 109136714 and ends at 109150104 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)C3orf85   53432
Cards
Entrez_Gene (NCBI)C3orf85  401081  chromosome 3 open reading frame 85
Aliases
GeneCards (Weizmann)C3orf85
Ensembl hg19 (Hinxton)ENSG00000241224 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241224 [Gene_View]  chr3:109136714-109150104 [Contig_View]  C3orf85 [Vega]
ICGC DataPortalENSG00000241224
TCGA cBioPortalC3orf85
AceView (NCBI)C3orf85
Genatlas (Paris)C3orf85
WikiGenes401081
SOURCE (Princeton)C3orf85
Genetics Home Reference (NIH)C3orf85
Genomic and cartography
GoldenPath hg38 (UCSC)C3orf85  -     chr3:109136714-109150104 +  3q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C3orf85  -     3q13.13   [Description]    (hg19-Feb_2009)
EnsemblC3orf85 - 3q13.13 [CytoView hg19]  C3orf85 - 3q13.13 [CytoView hg38]
Mapping of homologs : NCBIC3orf85 [Mapview hg19]  C3orf85 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026416
RefSeq transcript (Entrez)NM_001351622 NM_001351623
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C3orf85
Cluster EST : UnigeneHs.280892 [ NCBI ]
CGAP (NCI)Hs.280892
Alternative Splicing GalleryENSG00000241224
Gene ExpressionC3orf85 [ NCBI-GEO ]   C3orf85 [ EBI - ARRAY_EXPRESS ]   C3orf85 [ SEEK ]   C3orf85 [ MEM ]
Gene Expression Viewer (FireBrowse)C3orf85 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401081
GTEX Portal (Tissue expression)C3orf85
Human Protein AtlasENSG00000241224-C3orf85 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C3orf85
DMDM Disease mutations401081
Blocks (Seattle)C3orf85
Human Protein Atlas [tissue]ENSG00000241224-C3orf85 [tissue]
Protein Interaction databases
FunCoupENSG00000241224
BioGRIDC3orf85
STRING (EMBL)C3orf85
ZODIACC3orf85
Ontologies - Pathways
Huge Navigator C3orf85 [HugePedia]
snp3D : Map Gene to Disease401081
BioCentury BCIQC3orf85
ClinGenC3orf85
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401081
Clinical trialC3orf85
Miscellaneous
canSAR (ICR)C3orf85 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC3orf85
EVEXC3orf85
GoPubMedC3orf85
iHOPC3orf85
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:21:42 CET 2017

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