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C4A-AS1 (C4A antisense RNA 1)

Identity

Alias_namesC4A antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) C4A-AS1
LocusID (NCBI) 106478955
Atlas_Id 79787
Location 6_GL000256v2_alt  [Link to chromosome band 6]
Location_base_pair Starts at 3333903 and ends at 3337448 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)C4A-AS1   39753
Cards
Entrez_Gene (NCBI)C4A-AS1  106478955  C4A antisense RNA 1
Aliases
GeneCards (Weizmann)C4A-AS1
Ensembl hg19 (Hinxton)ENSG00000233627 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233627 [Gene_View]  chr6_GL000256v2_alt:3333903-3337448 [Contig_View]  C4A-AS1 [Vega]
ICGC DataPortalENSG00000233627
TCGA cBioPortalC4A-AS1
AceView (NCBI)C4A-AS1
Genatlas (Paris)C4A-AS1
WikiGenes106478955
SOURCE (Princeton)C4A-AS1
Genetics Home Reference (NIH)C4A-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)C4A-AS1  -     chr6_GL000256v2_alt:3333903-3337448 -  6_GL000256v2_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C4A-AS1  -     6_GL000256v2_alt   [Description]    (hg19-Feb_2009)
EnsemblC4A-AS1 - 6_GL000256v2_alt [CytoView hg19]  C4A-AS1 - 6_GL000256v2_alt [CytoView hg38]
Mapping of homologs : NCBIC4A-AS1 [Mapview hg19]  C4A-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK054612
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C4A-AS1
Cluster EST : UnigeneHs.534847 [ NCBI ]
CGAP (NCI)Hs.534847
Alternative Splicing GalleryENSG00000233627
Gene ExpressionC4A-AS1 [ NCBI-GEO ]   C4A-AS1 [ EBI - ARRAY_EXPRESS ]   C4A-AS1 [ SEEK ]   C4A-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)C4A-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106478955
GTEX Portal (Tissue expression)C4A-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C4A-AS1
DMDM Disease mutations106478955
Blocks (Seattle)C4A-AS1
Human Protein AtlasENSG00000233627
Protein Interaction databases
FunCoupENSG00000233627
BioGRIDC4A-AS1
STRING (EMBL)C4A-AS1
ZODIACC4A-AS1
Ontologies - Pathways
Huge Navigator C4A-AS1 [HugePedia]
snp3D : Map Gene to Disease106478955
BioCentury BCIQC4A-AS1
ClinGenC4A-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106478955
Clinical trialC4A-AS1
Miscellaneous
canSAR (ICR)C4A-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC4A-AS1
EVEXC4A-AS1
GoPubMedC4A-AS1
iHOPC4A-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:03:21 CEST 2017

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