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C4orf32 (chromosome 4 open reading frame 32)

Identity

Alias_symbol (synonym)FLJ39370
Other alias-
HGNC (Hugo) C4orf32
LocusID (NCBI) 132720
Atlas_Id 61199
Location 4q25  [Link to chromosome band 4q25]
Location_base_pair Starts at 112145397 and ends at 112189081 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NAA15 (4q31.1) / C4orf32 (4q25)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C4orf32   26813
Cards
Entrez_Gene (NCBI)C4orf32  132720  chromosome 4 open reading frame 32
Aliases
GeneCards (Weizmann)C4orf32
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:112145397-112189081 [Contig_View]  C4orf32 [Vega]
TCGA cBioPortalC4orf32
AceView (NCBI)C4orf32
Genatlas (Paris)C4orf32
WikiGenes132720
SOURCE (Princeton)C4orf32
Genetics Home Reference (NIH)C4orf32
Genomic and cartography
GoldenPath hg38 (UCSC)C4orf32  -     chr4:112145397-112189081 +  4q25   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C4orf32  -     4q25   [Description]    (hg19-Feb_2009)
EnsemblC4orf32 - 4q25 [CytoView hg19]  C4orf32 - 4q25 [CytoView hg38]
Mapping of homologs : NCBIC4orf32 [Mapview hg19]  C4orf32 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI634637 AK096689 BC022534 BC041964 BI463956
RefSeq transcript (Entrez)NM_152400
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C4orf32
Cluster EST : UnigeneHs.23439 [ NCBI ]
CGAP (NCI)Hs.23439
Gene ExpressionC4orf32 [ NCBI-GEO ]   C4orf32 [ EBI - ARRAY_EXPRESS ]   C4orf32 [ SEEK ]   C4orf32 [ MEM ]
Gene Expression Viewer (FireBrowse)C4orf32 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)132720
GTEX Portal (Tissue expression)C4orf32
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8J7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8J7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8J7
Splice isoforms : SwissVarQ8N8J7
PhosPhoSitePlusQ8N8J7
Domains : Interpro (EBI)DUF4605   
Domain families : Pfam (Sanger)DUF4605 (PF15378)   
Domain families : Pfam (NCBI)pfam15378   
Conserved Domain (NCBI)C4orf32
DMDM Disease mutations132720
Blocks (Seattle)C4orf32
SuperfamilyQ8N8J7
Peptide AtlasQ8N8J7
HPRD08252
IPIIPI00167492   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8J7
IntAct (EBI)Q8N8J7
BioGRIDC4orf32
STRING (EMBL)C4orf32
ZODIACC4orf32
Ontologies - Pathways
QuickGOQ8N8J7
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkC4orf32
Atlas of Cancer Signalling NetworkC4orf32
Wikipedia pathwaysC4orf32
Orthology - Evolution
OrthoDB132720
Phylogenetic Trees/Animal Genes : TreeFamC4orf32
HOVERGENQ8N8J7
HOGENOMQ8N8J7
Homologs : HomoloGeneC4orf32
Homology/Alignments : Family Browser (UCSC)C4orf32
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC4orf32 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C4orf32
dbVarC4orf32
ClinVarC4orf32
1000_GenomesC4orf32 
Exome Variant ServerC4orf32
ExAC (Exome Aggregation Consortium)C4orf32 (select the gene name)
Genetic variants : HAPMAP132720
Genomic Variants (DGV)C4orf32 [DGVbeta]
DECIPHERC4orf32 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC4orf32 
Mutations
ICGC Data PortalC4orf32 
TCGA Data PortalC4orf32 
Broad Tumor PortalC4orf32
OASIS PortalC4orf32 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC4orf32  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC4orf32
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C4orf32
DgiDB (Drug Gene Interaction Database)C4orf32
DoCM (Curated mutations)C4orf32 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C4orf32 (select a term)
intoGenC4orf32
Cancer3DC4orf32(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC4orf32
Genetic Testing Registry C4orf32
NextProtQ8N8J7 [Medical]
TSGene132720
GENETestsC4orf32
Huge Navigator C4orf32 [HugePedia]
snp3D : Map Gene to Disease132720
BioCentury BCIQC4orf32
ClinGenC4orf32
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD132720
Chemical/Pharm GKB GenePA162379734
Clinical trialC4orf32
Miscellaneous
canSAR (ICR)C4orf32 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC4orf32
EVEXC4orf32
GoPubMedC4orf32
iHOPC4orf32
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:03:34 CEST 2017

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