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C4orf33 (chromosome 4 open reading frame 33)

Identity

Alias_symbol (synonym)FLJ33703
Other alias-
HGNC (Hugo) C4orf33
LocusID (NCBI) 132321
Atlas_Id 61200
Location 4q28.2  [Link to chromosome band 4q28]
Location_base_pair Starts at 129096127 and ends at 129112688 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C4orf33   27025
Cards
Entrez_Gene (NCBI)C4orf33  132321  chromosome 4 open reading frame 33
Aliases
GeneCards (Weizmann)C4orf33
Ensembl hg19 (Hinxton)ENSG00000151470 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151470 [Gene_View]  chr4:129096127-129112688 [Contig_View]  C4orf33 [Vega]
ICGC DataPortalENSG00000151470
TCGA cBioPortalC4orf33
AceView (NCBI)C4orf33
Genatlas (Paris)C4orf33
WikiGenes132321
SOURCE (Princeton)C4orf33
Genetics Home Reference (NIH)C4orf33
Genomic and cartography
GoldenPath hg38 (UCSC)C4orf33  -     chr4:129096127-129112688 +  4q28.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C4orf33  -     4q28.2   [Description]    (hg19-Feb_2009)
EnsemblC4orf33 - 4q28.2 [CytoView hg19]  C4orf33 - 4q28.2 [CytoView hg38]
Mapping of homologs : NCBIC4orf33 [Mapview hg19]  C4orf33 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091022 AK309229 BC016358 BC032582 BE566349
RefSeq transcript (Entrez)NM_001099783 NM_173487
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C4orf33
Cluster EST : UnigeneHs.567679 [ NCBI ]
CGAP (NCI)Hs.567679
Alternative Splicing GalleryENSG00000151470
Gene ExpressionC4orf33 [ NCBI-GEO ]   C4orf33 [ EBI - ARRAY_EXPRESS ]   C4orf33 [ SEEK ]   C4orf33 [ MEM ]
Gene Expression Viewer (FireBrowse)C4orf33 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)132321
GTEX Portal (Tissue expression)C4orf33
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N1A6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N1A6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N1A6
Splice isoforms : SwissVarQ8N1A6
PhosPhoSitePlusQ8N1A6
Domains : Interpro (EBI)C4orf33   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C4orf33
DMDM Disease mutations132321
Blocks (Seattle)C4orf33
SuperfamilyQ8N1A6
Human Protein AtlasENSG00000151470
Peptide AtlasQ8N1A6
HPRD14049
IPIIPI00166127   IPI00955796   IPI00967114   IPI00965454   IPI00965762   
Protein Interaction databases
DIP (DOE-UCLA)Q8N1A6
IntAct (EBI)Q8N1A6
FunCoupENSG00000151470
BioGRIDC4orf33
STRING (EMBL)C4orf33
ZODIACC4orf33
Ontologies - Pathways
QuickGOQ8N1A6
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkC4orf33
Atlas of Cancer Signalling NetworkC4orf33
Wikipedia pathwaysC4orf33
Orthology - Evolution
OrthoDB132321
GeneTree (enSembl)ENSG00000151470
Phylogenetic Trees/Animal Genes : TreeFamC4orf33
HOVERGENQ8N1A6
HOGENOMQ8N1A6
Homologs : HomoloGeneC4orf33
Homology/Alignments : Family Browser (UCSC)C4orf33
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC4orf33 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C4orf33
dbVarC4orf33
ClinVarC4orf33
1000_GenomesC4orf33 
Exome Variant ServerC4orf33
ExAC (Exome Aggregation Consortium)C4orf33 (select the gene name)
Genetic variants : HAPMAP132321
Genomic Variants (DGV)C4orf33 [DGVbeta]
DECIPHERC4orf33 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC4orf33 
Mutations
ICGC Data PortalC4orf33 
TCGA Data PortalC4orf33 
Broad Tumor PortalC4orf33
OASIS PortalC4orf33 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC4orf33  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC4orf33
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C4orf33
DgiDB (Drug Gene Interaction Database)C4orf33
DoCM (Curated mutations)C4orf33 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C4orf33 (select a term)
intoGenC4orf33
Cancer3DC4orf33(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC4orf33
Genetic Testing Registry C4orf33
NextProtQ8N1A6 [Medical]
TSGene132321
GENETestsC4orf33
Target ValidationC4orf33
Huge Navigator C4orf33 [HugePedia]
snp3D : Map Gene to Disease132321
BioCentury BCIQC4orf33
ClinGenC4orf33
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD132321
Chemical/Pharm GKB GenePA162379743
Clinical trialC4orf33
Miscellaneous
canSAR (ICR)C4orf33 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC4orf33
EVEXC4orf33
GoPubMedC4orf33
iHOPC4orf33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:41:18 CEST 2017

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