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C5orf66-AS2 (C5orf66 antisense RNA 2)

Identity

Other alias-
HGNC (Hugo) C5orf66-AS2
LocusID (NCBI) 340073
Atlas_Id 61229
Location 5q31.1  [Link to chromosome band 5q31]
Location_base_pair Starts at 135236234 and ends at 135248177 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C5orf66-AS2   27964
Cards
Entrez_Gene (NCBI)C5orf66-AS2  340073  C5orf66 antisense RNA 2
Aliases
GeneCards (Weizmann)C5orf66-AS2
Ensembl hg19 (Hinxton)ENSG00000249647 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249647 [Gene_View]  chr5:135236234-135248177 [Contig_View]  C5orf66-AS2 [Vega]
ICGC DataPortalENSG00000249647
TCGA cBioPortalC5orf66-AS2
AceView (NCBI)C5orf66-AS2
Genatlas (Paris)C5orf66-AS2
WikiGenes340073
SOURCE (Princeton)C5orf66-AS2
Genetics Home Reference (NIH)C5orf66-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)C5orf66-AS2  -     chr5:135236234-135248177 -  5q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C5orf66-AS2  -     5q31.1   [Description]    (hg19-Feb_2009)
EnsemblC5orf66-AS2 - 5q31.1 [CytoView hg19]  C5orf66-AS2 - 5q31.1 [CytoView hg38]
Mapping of homologs : NCBIC5orf66-AS2 [Mapview hg19]  C5orf66-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA469978 BC045187
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C5orf66-AS2
Cluster EST : UnigeneHs.434422 [ NCBI ]
CGAP (NCI)Hs.434422
Alternative Splicing GalleryENSG00000249647
Gene ExpressionC5orf66-AS2 [ NCBI-GEO ]   C5orf66-AS2 [ EBI - ARRAY_EXPRESS ]   C5orf66-AS2 [ SEEK ]   C5orf66-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)C5orf66-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)340073
GTEX Portal (Tissue expression)C5orf66-AS2
Human Protein AtlasENSG00000249647-C5orf66-AS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C5orf66-AS2
DMDM Disease mutations340073
Blocks (Seattle)C5orf66-AS2
Human Protein Atlas [tissue]ENSG00000249647-C5orf66-AS2 [tissue]
IPIIPI00964752   
Protein Interaction databases
FunCoupENSG00000249647
BioGRIDC5orf66-AS2
STRING (EMBL)C5orf66-AS2
ZODIACC5orf66-AS2
Ontologies - Pathways
Huge Navigator C5orf66-AS2 [HugePedia]
snp3D : Map Gene to Disease340073
BioCentury BCIQC5orf66-AS2
ClinGenC5orf66-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340073
Clinical trialC5orf66-AS2
Miscellaneous
canSAR (ICR)C5orf66-AS2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC5orf66-AS2
EVEXC5orf66-AS2
GoPubMedC5orf66-AS2
iHOPC5orf66-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:40:41 CET 2017

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