Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

C7orf26 (chromosome 7 open reading frame 26)

Identity

Alias_symbol (synonym)MGC2718
Other alias-
HGNC (Hugo) C7orf26
LocusID (NCBI) 79034
Atlas_Id 61258
Location 7p22.1  [Link to chromosome band 7p22]
Location_base_pair Starts at 6590021 and ends at 6608726 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SCAMP4 (19p13.3) / C7orf26 (7p22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C7orf26   21702
Cards
Entrez_Gene (NCBI)C7orf26  79034  chromosome 7 open reading frame 26
Aliases
GeneCards (Weizmann)C7orf26
Ensembl hg19 (Hinxton)ENSG00000146576 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146576 [Gene_View]  chr7:6590021-6608726 [Contig_View]  C7orf26 [Vega]
ICGC DataPortalENSG00000146576
TCGA cBioPortalC7orf26
AceView (NCBI)C7orf26
Genatlas (Paris)C7orf26
WikiGenes79034
SOURCE (Princeton)C7orf26
Genetics Home Reference (NIH)C7orf26
Genomic and cartography
GoldenPath hg38 (UCSC)C7orf26  -     chr7:6590021-6608726 +  7p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C7orf26  -     7p22.1   [Description]    (hg19-Feb_2009)
EnsemblC7orf26 - 7p22.1 [CytoView hg19]  C7orf26 - 7p22.1 [CytoView hg38]
Mapping of homologs : NCBIC7orf26 [Mapview hg19]  C7orf26 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056149 BC001076 BC005121 BI599533 BM977018
RefSeq transcript (Entrez)NM_001303039 NM_024067
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C7orf26
Cluster EST : UnigeneHs.487511 [ NCBI ]
CGAP (NCI)Hs.487511
Alternative Splicing GalleryENSG00000146576
Gene ExpressionC7orf26 [ NCBI-GEO ]   C7orf26 [ EBI - ARRAY_EXPRESS ]   C7orf26 [ SEEK ]   C7orf26 [ MEM ]
Gene Expression Viewer (FireBrowse)C7orf26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79034
GTEX Portal (Tissue expression)C7orf26
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96N11   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96N11  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96N11
Splice isoforms : SwissVarQ96N11
PhosPhoSitePlusQ96N11
Domains : Interpro (EBI)DUF4507   
Domain families : Pfam (Sanger)DUF4507 (PF14964)   
Domain families : Pfam (NCBI)pfam14964   
Conserved Domain (NCBI)C7orf26
DMDM Disease mutations79034
Blocks (Seattle)C7orf26
SuperfamilyQ96N11
Human Protein AtlasENSG00000146576
Peptide AtlasQ96N11
HPRD12913
IPIIPI00043294   IPI00031632   IPI00894405   IPI00893708   
Protein Interaction databases
DIP (DOE-UCLA)Q96N11
IntAct (EBI)Q96N11
FunCoupENSG00000146576
BioGRIDC7orf26
STRING (EMBL)C7orf26
ZODIACC7orf26
Ontologies - Pathways
QuickGOQ96N11
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC7orf26
Atlas of Cancer Signalling NetworkC7orf26
Wikipedia pathwaysC7orf26
Orthology - Evolution
OrthoDB79034
GeneTree (enSembl)ENSG00000146576
Phylogenetic Trees/Animal Genes : TreeFamC7orf26
HOVERGENQ96N11
HOGENOMQ96N11
Homologs : HomoloGeneC7orf26
Homology/Alignments : Family Browser (UCSC)C7orf26
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC7orf26 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C7orf26
dbVarC7orf26
ClinVarC7orf26
1000_GenomesC7orf26 
Exome Variant ServerC7orf26
ExAC (Exome Aggregation Consortium)C7orf26 (select the gene name)
Genetic variants : HAPMAP79034
Genomic Variants (DGV)C7orf26 [DGVbeta]
DECIPHERC7orf26 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC7orf26 
Mutations
ICGC Data PortalC7orf26 
TCGA Data PortalC7orf26 
Broad Tumor PortalC7orf26
OASIS PortalC7orf26 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC7orf26  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC7orf26
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C7orf26
DgiDB (Drug Gene Interaction Database)C7orf26
DoCM (Curated mutations)C7orf26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C7orf26 (select a term)
intoGenC7orf26
Cancer3DC7orf26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC7orf26
Genetic Testing Registry C7orf26
NextProtQ96N11 [Medical]
TSGene79034
GENETestsC7orf26
Huge Navigator C7orf26 [HugePedia]
snp3D : Map Gene to Disease79034
BioCentury BCIQC7orf26
ClinGenC7orf26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79034
Chemical/Pharm GKB GenePA134951741
Clinical trialC7orf26
Miscellaneous
canSAR (ICR)C7orf26 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC7orf26
EVEXC7orf26
GoPubMedC7orf26
iHOPC7orf26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:03:48 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.