Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C7orf33 (chromosome 7 open reading frame 33)

Identity

Other alias-
HGNC (Hugo) C7orf33
LocusID (NCBI) 202865
Atlas_Id 61260
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 148590565 and ends at 148615860 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C7orf33   21724
Cards
Entrez_Gene (NCBI)C7orf33  202865  chromosome 7 open reading frame 33
Aliases
GeneCards (Weizmann)C7orf33
Ensembl hg19 (Hinxton)ENSG00000170279 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170279 [Gene_View]  chr7:148590565-148615860 [Contig_View]  C7orf33 [Vega]
ICGC DataPortalENSG00000170279
TCGA cBioPortalC7orf33
AceView (NCBI)C7orf33
Genatlas (Paris)C7orf33
WikiGenes202865
SOURCE (Princeton)C7orf33
Genetics Home Reference (NIH)C7orf33
Genomic and cartography
GoldenPath hg38 (UCSC)C7orf33  -     chr7:148590565-148615860 +  7q36.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C7orf33  -     7q36.1   [Description]    (hg19-Feb_2009)
EnsemblC7orf33 - 7q36.1 [CytoView hg19]  C7orf33 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIC7orf33 [Mapview hg19]  C7orf33 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC021251 JF432437
RefSeq transcript (Entrez)NM_145304
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C7orf33
Cluster EST : UnigeneHs.352212 [ NCBI ]
CGAP (NCI)Hs.352212
Alternative Splicing GalleryENSG00000170279
Gene ExpressionC7orf33 [ NCBI-GEO ]   C7orf33 [ EBI - ARRAY_EXPRESS ]   C7orf33 [ SEEK ]   C7orf33 [ MEM ]
Gene Expression Viewer (FireBrowse)C7orf33 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)202865
GTEX Portal (Tissue expression)C7orf33
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WU49   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WU49  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WU49
Splice isoforms : SwissVarQ8WU49
PhosPhoSitePlusQ8WU49
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C7orf33
DMDM Disease mutations202865
Blocks (Seattle)C7orf33
SuperfamilyQ8WU49
Human Protein AtlasENSG00000170279
Peptide AtlasQ8WU49
HPRD12921
IPIIPI00102832   
Protein Interaction databases
DIP (DOE-UCLA)Q8WU49
IntAct (EBI)Q8WU49
FunCoupENSG00000170279
BioGRIDC7orf33
STRING (EMBL)C7orf33
ZODIACC7orf33
Ontologies - Pathways
QuickGOQ8WU49
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC7orf33
Atlas of Cancer Signalling NetworkC7orf33
Wikipedia pathwaysC7orf33
Orthology - Evolution
OrthoDB202865
GeneTree (enSembl)ENSG00000170279
Phylogenetic Trees/Animal Genes : TreeFamC7orf33
HOVERGENQ8WU49
HOGENOMQ8WU49
Homologs : HomoloGeneC7orf33
Homology/Alignments : Family Browser (UCSC)C7orf33
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC7orf33 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C7orf33
dbVarC7orf33
ClinVarC7orf33
1000_GenomesC7orf33 
Exome Variant ServerC7orf33
ExAC (Exome Aggregation Consortium)C7orf33 (select the gene name)
Genetic variants : HAPMAP202865
Genomic Variants (DGV)C7orf33 [DGVbeta]
DECIPHERC7orf33 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC7orf33 
Mutations
ICGC Data PortalC7orf33 
TCGA Data PortalC7orf33 
Broad Tumor PortalC7orf33
OASIS PortalC7orf33 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC7orf33  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC7orf33
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C7orf33
DgiDB (Drug Gene Interaction Database)C7orf33
DoCM (Curated mutations)C7orf33 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C7orf33 (select a term)
intoGenC7orf33
Cancer3DC7orf33(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC7orf33
Genetic Testing Registry C7orf33
NextProtQ8WU49 [Medical]
TSGene202865
GENETestsC7orf33
Target ValidationC7orf33
Huge Navigator C7orf33 [HugePedia]
snp3D : Map Gene to Disease202865
BioCentury BCIQC7orf33
ClinGenC7orf33
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD202865
Chemical/Pharm GKB GenePA134962911
Clinical trialC7orf33
Miscellaneous
canSAR (ICR)C7orf33 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC7orf33
EVEXC7orf33
GoPubMedC7orf33
iHOPC7orf33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:41:30 CEST 2017

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