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C7orf62 (chromosome 7 open reading frame 62)

Identity

Alias_symbol (synonym)MGC26647
Other alias-
HGNC (Hugo) C7orf62
LocusID (NCBI) 219557
Atlas_Id 61269
Location 7q21.13  [Link to chromosome band 7q21]
Location_base_pair Starts at 88423420 and ends at 88425031 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C7orf62   22402
Cards
Entrez_Gene (NCBI)C7orf62  219557  chromosome 7 open reading frame 62
Aliases
GeneCards (Weizmann)C7orf62
Ensembl hg19 (Hinxton)ENSG00000164645 [Gene_View]  chr7:88423420-88425031 [Contig_View]  C7orf62 [Vega]
Ensembl hg38 (Hinxton)ENSG00000164645 [Gene_View]  chr7:88423420-88425031 [Contig_View]  C7orf62 [Vega]
ICGC DataPortalENSG00000164645
TCGA cBioPortalC7orf62
AceView (NCBI)C7orf62
Genatlas (Paris)C7orf62
WikiGenes219557
SOURCE (Princeton)C7orf62
Genetics Home Reference (NIH)C7orf62
Genomic and cartography
GoldenPath hg19 (UCSC)C7orf62  -     chr7:88423420-88425031 -  7q21.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C7orf62  -     7q21.13   [Description]    (hg38-Dec_2013)
EnsemblC7orf62 - 7q21.13 [CytoView hg19]  C7orf62 - 7q21.13 [CytoView hg38]
Mapping of homologs : NCBIC7orf62 [Mapview hg19]  C7orf62 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC028365 HQ447090
RefSeq transcript (Entrez)NM_152706
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)C7orf62
Cluster EST : UnigeneHs.112877 [ NCBI ]
CGAP (NCI)Hs.112877
Alternative Splicing GalleryENSG00000164645
Gene ExpressionC7orf62 [ NCBI-GEO ]   C7orf62 [ EBI - ARRAY_EXPRESS ]   C7orf62 [ SEEK ]   C7orf62 [ MEM ]
Gene Expression Viewer (FireBrowse)C7orf62 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219557
GTEX Portal (Tissue expression)C7orf62
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TBZ9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TBZ9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TBZ9
Splice isoforms : SwissVarQ8TBZ9
PhosPhoSitePlusQ8TBZ9
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C7orf62
DMDM Disease mutations219557
Blocks (Seattle)C7orf62
SuperfamilyQ8TBZ9
Human Protein AtlasENSG00000164645
Peptide AtlasQ8TBZ9
HPRD14507
IPIIPI00152328   
Protein Interaction databases
DIP (DOE-UCLA)Q8TBZ9
IntAct (EBI)Q8TBZ9
FunCoupENSG00000164645
BioGRIDC7orf62
STRING (EMBL)C7orf62
ZODIACC7orf62
Ontologies - Pathways
QuickGOQ8TBZ9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC7orf62
Atlas of Cancer Signalling NetworkC7orf62
Wikipedia pathwaysC7orf62
Orthology - Evolution
OrthoDB219557
GeneTree (enSembl)ENSG00000164645
Phylogenetic Trees/Animal Genes : TreeFamC7orf62
HOVERGENQ8TBZ9
HOGENOMQ8TBZ9
Homologs : HomoloGeneC7orf62
Homology/Alignments : Family Browser (UCSC)C7orf62
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC7orf62 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C7orf62
dbVarC7orf62
ClinVarC7orf62
1000_GenomesC7orf62 
Exome Variant ServerC7orf62
ExAC (Exome Aggregation Consortium)C7orf62 (select the gene name)
Genetic variants : HAPMAP219557
Genomic Variants (DGV)C7orf62 [DGVbeta]
DECIPHER (Syndromes)7:88423420-88425031  ENSG00000164645
CONAN: Copy Number AnalysisC7orf62 
Mutations
ICGC Data PortalC7orf62 
TCGA Data PortalC7orf62 
Broad Tumor PortalC7orf62
OASIS PortalC7orf62 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC7orf62  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC7orf62
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C7orf62
DgiDB (Drug Gene Interaction Database)C7orf62
DoCM (Curated mutations)C7orf62 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C7orf62 (select a term)
intoGenC7orf62
Cancer3DC7orf62(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC7orf62
Genetic Testing Registry C7orf62
NextProtQ8TBZ9 [Medical]
TSGene219557
GENETestsC7orf62
Huge Navigator C7orf62 [HugePedia]
snp3D : Map Gene to Disease219557
BioCentury BCIQC7orf62
ClinGenC7orf62
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD219557
Chemical/Pharm GKB GenePA162380726
Clinical trialC7orf62
Miscellaneous
canSAR (ICR)C7orf62 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC7orf62
EVEXC7orf62
GoPubMedC7orf62
iHOPC7orf62
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:57:37 CET 2017

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