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C7orf65 (chromosome 7 open reading frame 65)

Identity

Alias_symbol (synonym)FLJ44108
Other alias-
HGNC (Hugo) C7orf65
LocusID (NCBI) 401335
Atlas_Id 61270
Location 7p12.3  [Link to chromosome band 7p12]
Location_base_pair Starts at 47655244 and ends at 47661648 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C7orf65   34432
Cards
Entrez_Gene (NCBI)C7orf65  401335  chromosome 7 open reading frame 65
Aliases
GeneCards (Weizmann)C7orf65
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:47655244-47661648 [Contig_View]  C7orf65 [Vega]
TCGA cBioPortalC7orf65
AceView (NCBI)C7orf65
Genatlas (Paris)C7orf65
WikiGenes401335
SOURCE (Princeton)C7orf65
Genetics Home Reference (NIH)C7orf65
Genomic and cartography
GoldenPath hg38 (UCSC)C7orf65  -     chr7:47655244-47661648 +  7p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C7orf65  -     7p12.3   [Description]    (hg19-Feb_2009)
EnsemblC7orf65 - 7p12.3 [CytoView hg19]  C7orf65 - 7p12.3 [CytoView hg38]
Mapping of homologs : NCBIC7orf65 [Mapview hg19]  C7orf65 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126096 DB341636
RefSeq transcript (Entrez)NM_001123065
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C7orf65
Cluster EST : UnigeneHs.520816 [ NCBI ]
CGAP (NCI)Hs.520816
Gene ExpressionC7orf65 [ NCBI-GEO ]   C7orf65 [ EBI - ARRAY_EXPRESS ]   C7orf65 [ SEEK ]   C7orf65 [ MEM ]
Gene Expression Viewer (FireBrowse)C7orf65 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401335
GTEX Portal (Tissue expression)C7orf65
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZTY9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZTY9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZTY9
Splice isoforms : SwissVarQ6ZTY9
PhosPhoSitePlusQ6ZTY9
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C7orf65
DMDM Disease mutations401335
Blocks (Seattle)C7orf65
SuperfamilyQ6ZTY9
Peptide AtlasQ6ZTY9
IPIIPI00419011   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZTY9
IntAct (EBI)Q6ZTY9
BioGRIDC7orf65
STRING (EMBL)C7orf65
ZODIACC7orf65
Ontologies - Pathways
QuickGOQ6ZTY9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC7orf65
Atlas of Cancer Signalling NetworkC7orf65
Wikipedia pathwaysC7orf65
Orthology - Evolution
OrthoDB401335
Phylogenetic Trees/Animal Genes : TreeFamC7orf65
HOVERGENQ6ZTY9
HOGENOMQ6ZTY9
Homologs : HomoloGeneC7orf65
Homology/Alignments : Family Browser (UCSC)C7orf65
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC7orf65 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C7orf65
dbVarC7orf65
ClinVarC7orf65
1000_GenomesC7orf65 
Exome Variant ServerC7orf65
ExAC (Exome Aggregation Consortium)C7orf65 (select the gene name)
Genetic variants : HAPMAP401335
Genomic Variants (DGV)C7orf65 [DGVbeta]
DECIPHERC7orf65 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC7orf65 
Mutations
ICGC Data PortalC7orf65 
TCGA Data PortalC7orf65 
Broad Tumor PortalC7orf65
OASIS PortalC7orf65 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC7orf65  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC7orf65
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C7orf65
DgiDB (Drug Gene Interaction Database)C7orf65
DoCM (Curated mutations)C7orf65 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C7orf65 (select a term)
intoGenC7orf65
Cancer3DC7orf65(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC7orf65
Genetic Testing Registry C7orf65
NextProtQ6ZTY9 [Medical]
TSGene401335
GENETestsC7orf65
Target ValidationC7orf65
Huge Navigator C7orf65 [HugePedia]
snp3D : Map Gene to Disease401335
BioCentury BCIQC7orf65
ClinGenC7orf65
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401335
Chemical/Pharm GKB GenePA164717398
Clinical trialC7orf65
Miscellaneous
canSAR (ICR)C7orf65 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC7orf65
EVEXC7orf65
GoPubMedC7orf65
iHOPC7orf65
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:03:32 CEST 2017

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