Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C7orf66 (chromosome 7 open reading frame 66)

Identity

Other alias-
HGNC (Hugo) C7orf66
LocusID (NCBI) 154907
Atlas_Id 61271
Location 7q31.1  [Link to chromosome band 7q31]
Location_base_pair Starts at 108883975 and ends at 108884587 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C7orf66   33712
Cards
Entrez_Gene (NCBI)C7orf66  154907  chromosome 7 open reading frame 66
Aliases
GeneCards (Weizmann)C7orf66
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:108883975-108884587 [Contig_View]  C7orf66 [Vega]
TCGA cBioPortalC7orf66
AceView (NCBI)C7orf66
Genatlas (Paris)C7orf66
WikiGenes154907
SOURCE (Princeton)C7orf66
Genetics Home Reference (NIH)C7orf66
Genomic and cartography
GoldenPath hg38 (UCSC)C7orf66  -     chr7:108883975-108884587 -  7q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C7orf66  -     7q31.1   [Description]    (hg19-Feb_2009)
EnsemblC7orf66 - 7q31.1 [CytoView hg19]  C7orf66 - 7q31.1 [CytoView hg38]
Mapping of homologs : NCBIC7orf66 [Mapview hg19]  C7orf66 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI126292 BG211856
RefSeq transcript (Entrez)NM_001024607
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C7orf66
Cluster EST : UnigeneHs.276325 [ NCBI ]
CGAP (NCI)Hs.276325
Gene ExpressionC7orf66 [ NCBI-GEO ]   C7orf66 [ EBI - ARRAY_EXPRESS ]   C7orf66 [ SEEK ]   C7orf66 [ MEM ]
Gene Expression Viewer (FireBrowse)C7orf66 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)154907
GTEX Portal (Tissue expression)C7orf66
Protein : pattern, domain, 3D structure
UniProt/SwissProtA4D0T2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA4D0T2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA4D0T2
Splice isoforms : SwissVarA4D0T2
PhosPhoSitePlusA4D0T2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C7orf66
DMDM Disease mutations154907
Blocks (Seattle)C7orf66
SuperfamilyA4D0T2
Peptide AtlasA4D0T2
HPRD18563
IPIIPI00086419   
Protein Interaction databases
DIP (DOE-UCLA)A4D0T2
IntAct (EBI)A4D0T2
BioGRIDC7orf66
STRING (EMBL)C7orf66
ZODIACC7orf66
Ontologies - Pathways
QuickGOA4D0T2
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkC7orf66
Atlas of Cancer Signalling NetworkC7orf66
Wikipedia pathwaysC7orf66
Orthology - Evolution
OrthoDB154907
Phylogenetic Trees/Animal Genes : TreeFamC7orf66
HOVERGENA4D0T2
HOGENOMA4D0T2
Homologs : HomoloGeneC7orf66
Homology/Alignments : Family Browser (UCSC)C7orf66
Gene fusions - Rearrangements
Tumor Fusion PortalC7orf66
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC7orf66 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C7orf66
dbVarC7orf66
ClinVarC7orf66
1000_GenomesC7orf66 
Exome Variant ServerC7orf66
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP154907
Genomic Variants (DGV)C7orf66 [DGVbeta]
DECIPHERC7orf66 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC7orf66 
Mutations
ICGC Data PortalC7orf66 
TCGA Data PortalC7orf66 
Broad Tumor PortalC7orf66
OASIS PortalC7orf66 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC7orf66  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC7orf66
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C7orf66
DgiDB (Drug Gene Interaction Database)C7orf66
DoCM (Curated mutations)C7orf66 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C7orf66 (select a term)
intoGenC7orf66
Cancer3DC7orf66(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETC7orf66
MedgenC7orf66
Genetic Testing Registry C7orf66
NextProtA4D0T2 [Medical]
TSGene154907
GENETestsC7orf66
Target ValidationC7orf66
Huge Navigator C7orf66 [HugePedia]
snp3D : Map Gene to Disease154907
BioCentury BCIQC7orf66
ClinGenC7orf66
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD154907
Chemical/Pharm GKB GenePA164717407
Clinical trialC7orf66
Miscellaneous
canSAR (ICR)C7orf66 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC7orf66
EVEXC7orf66
GoPubMedC7orf66
iHOPC7orf66
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:15:47 CET 2017

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