Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C7orf69 (chromosome 7 open reading frame 69)

Identity

Alias_symbol (synonym)FLJ21075
Other alias-
HGNC (Hugo) C7orf69
LocusID (NCBI) 80099
Atlas_Id 61272
Location 7p12.3  [Link to chromosome band 7p12]
Location_base_pair Starts at 47834889 and ends at 47859444 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C7orf69   21911
Cards
Entrez_Gene (NCBI)C7orf69  80099  chromosome 7 open reading frame 69
Aliases
GeneCards (Weizmann)C7orf69
Ensembl hg19 (Hinxton) [Gene_View]  chr7:47834889-47859444 [Contig_View]  C7orf69 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:47834889-47859444 [Contig_View]  C7orf69 [Vega]
TCGA cBioPortalC7orf69
AceView (NCBI)C7orf69
Genatlas (Paris)C7orf69
WikiGenes80099
SOURCE (Princeton)C7orf69
Genetics Home Reference (NIH)C7orf69
Genomic and cartography
GoldenPath hg19 (UCSC)C7orf69  -     chr7:47834889-47859444 +  7p12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C7orf69  -     7p12.3   [Description]    (hg38-Dec_2013)
EnsemblC7orf69 - 7p12.3 [CytoView hg19]  C7orf69 - 7p12.3 [CytoView hg38]
Mapping of homologs : NCBIC7orf69 [Mapview hg19]  C7orf69 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024728 BC113679 BC113681 CA420605 DA711092
RefSeq transcript (Entrez)NM_001302627 NM_025031
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929329
Consensus coding sequences : CCDS (NCBI)C7orf69
Cluster EST : UnigeneHs.287647 [ NCBI ]
CGAP (NCI)Hs.287647
Gene ExpressionC7orf69 [ NCBI-GEO ]   C7orf69 [ EBI - ARRAY_EXPRESS ]   C7orf69 [ SEEK ]   C7orf69 [ MEM ]
Gene Expression Viewer (FireBrowse)C7orf69 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80099
GTEX Portal (Tissue expression)C7orf69
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H7B7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H7B7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H7B7
Splice isoforms : SwissVarQ9H7B7
PhosPhoSitePlusQ9H7B7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C7orf69
DMDM Disease mutations80099
Blocks (Seattle)C7orf69
SuperfamilyQ9H7B7
Peptide AtlasQ9H7B7
HPRD08635
IPIIPI00017879   IPI00924959   
Protein Interaction databases
DIP (DOE-UCLA)Q9H7B7
IntAct (EBI)Q9H7B7
BioGRIDC7orf69
STRING (EMBL)C7orf69
ZODIACC7orf69
Ontologies - Pathways
QuickGOQ9H7B7
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkC7orf69
Atlas of Cancer Signalling NetworkC7orf69
Wikipedia pathwaysC7orf69
Orthology - Evolution
OrthoDB80099
Phylogenetic Trees/Animal Genes : TreeFamC7orf69
HOVERGENQ9H7B7
HOGENOMQ9H7B7
Homologs : HomoloGeneC7orf69
Homology/Alignments : Family Browser (UCSC)C7orf69
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC7orf69 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C7orf69
dbVarC7orf69
ClinVarC7orf69
1000_GenomesC7orf69 
Exome Variant ServerC7orf69
ExAC (Exome Aggregation Consortium)C7orf69 (select the gene name)
Genetic variants : HAPMAP80099
Genomic Variants (DGV)C7orf69 [DGVbeta]
DECIPHER (Syndromes)7:47834889-47859444  
CONAN: Copy Number AnalysisC7orf69 
Mutations
ICGC Data PortalC7orf69 
TCGA Data PortalC7orf69 
Broad Tumor PortalC7orf69
OASIS PortalC7orf69 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC7orf69  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC7orf69
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C7orf69
DgiDB (Drug Gene Interaction Database)C7orf69
DoCM (Curated mutations)C7orf69 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C7orf69 (select a term)
intoGenC7orf69
Cancer3DC7orf69(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC7orf69
Genetic Testing Registry C7orf69
NextProtQ9H7B7 [Medical]
TSGene80099
GENETestsC7orf69
Huge Navigator C7orf69 [HugePedia]
snp3D : Map Gene to Disease80099
BioCentury BCIQC7orf69
ClinGenC7orf69
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80099
Chemical/Pharm GKB GenePA164717466
Clinical trialC7orf69
Miscellaneous
canSAR (ICR)C7orf69 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC7orf69
EVEXC7orf69
GoPubMedC7orf69
iHOPC7orf69
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:57:37 CET 2017

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