Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C7orf76 (chromosome 7 open reading frame 76)

Identity

Alias_symbol (synonym)FLJ42280
Other alias-
HGNC (Hugo) C7orf76
LocusID (NCBI) 401388
Atlas_Id 61276
Location 7q21.3  [Link to chromosome band 7q21]
Location_base_pair Starts at 96110938 and ends at 96132835 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C7orf76   33815
Cards
Entrez_Gene (NCBI)C7orf76  401388  chromosome 7 open reading frame 76
Aliases
GeneCards (Weizmann)C7orf76
Ensembl hg19 (Hinxton)ENSG00000127922 [Gene_View]  chr7:96110938-96132835 [Contig_View]  C7orf76 [Vega]
Ensembl hg38 (Hinxton)ENSG00000127922 [Gene_View]  chr7:96110938-96132835 [Contig_View]  C7orf76 [Vega]
ICGC DataPortalENSG00000127922
TCGA cBioPortalC7orf76
AceView (NCBI)C7orf76
Genatlas (Paris)C7orf76
WikiGenes401388
SOURCE (Princeton)C7orf76
Genetics Home Reference (NIH)C7orf76
Genomic and cartography
GoldenPath hg19 (UCSC)C7orf76  -     chr7:96110938-96132835 -  7q21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C7orf76  -     7q21.3   [Description]    (hg38-Dec_2013)
EnsemblC7orf76 - 7q21.3 [CytoView hg19]  C7orf76 - 7q21.3 [CytoView hg38]
Mapping of homologs : NCBIC7orf76 [Mapview hg19]  C7orf76 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124274 BC140736 BC171740
RefSeq transcript (Entrez)NM_001201450 NM_001201451 NM_207503
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)C7orf76
Cluster EST : UnigeneHs.734935 [ NCBI ]
CGAP (NCI)Hs.734935
Alternative Splicing GalleryENSG00000127922
Gene ExpressionC7orf76 [ NCBI-GEO ]   C7orf76 [ EBI - ARRAY_EXPRESS ]   C7orf76 [ SEEK ]   C7orf76 [ MEM ]
Gene Expression Viewer (FireBrowse)C7orf76 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401388
GTEX Portal (Tissue expression)C7orf76
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZVN7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZVN7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZVN7
Splice isoforms : SwissVarQ6ZVN7
PhosPhoSitePlusQ6ZVN7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C7orf76
DMDM Disease mutations401388
Blocks (Seattle)C7orf76
SuperfamilyQ6ZVN7
Human Protein AtlasENSG00000127922
Peptide AtlasQ6ZVN7
HPRD16959
IPIIPI00410562   IPI00981932   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZVN7
IntAct (EBI)Q6ZVN7
FunCoupENSG00000127922
BioGRIDC7orf76
STRING (EMBL)C7orf76
ZODIACC7orf76
Ontologies - Pathways
QuickGOQ6ZVN7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC7orf76
Atlas of Cancer Signalling NetworkC7orf76
Wikipedia pathwaysC7orf76
Orthology - Evolution
OrthoDB401388
GeneTree (enSembl)ENSG00000127922
Phylogenetic Trees/Animal Genes : TreeFamC7orf76
HOVERGENQ6ZVN7
HOGENOMQ6ZVN7
Homologs : HomoloGeneC7orf76
Homology/Alignments : Family Browser (UCSC)C7orf76
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC7orf76 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C7orf76
dbVarC7orf76
ClinVarC7orf76
1000_GenomesC7orf76 
Exome Variant ServerC7orf76
ExAC (Exome Aggregation Consortium)C7orf76 (select the gene name)
Genetic variants : HAPMAP401388
Genomic Variants (DGV)C7orf76 [DGVbeta]
DECIPHER (Syndromes)7:96110938-96132835  ENSG00000127922
CONAN: Copy Number AnalysisC7orf76 
Mutations
ICGC Data PortalC7orf76 
TCGA Data PortalC7orf76 
Broad Tumor PortalC7orf76
OASIS PortalC7orf76 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDC7orf76
BioMutasearch C7orf76
DgiDB (Drug Gene Interaction Database)C7orf76
DoCM (Curated mutations)C7orf76 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C7orf76 (select a term)
intoGenC7orf76
Cancer3DC7orf76(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC7orf76
Genetic Testing Registry C7orf76
NextProtQ6ZVN7 [Medical]
TSGene401388
GENETestsC7orf76
Huge Navigator C7orf76 [HugePedia]
snp3D : Map Gene to Disease401388
BioCentury BCIQC7orf76
ClinGenC7orf76
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401388
Clinical trialC7orf76
Miscellaneous
canSAR (ICR)C7orf76 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC7orf76
EVEXC7orf76
GoPubMedC7orf76
iHOPC7orf76
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:57:38 CET 2017

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