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C8orf17 (chromosome 8 open reading frame 17)

Identity

Alias_symbol (synonym)MOST-1
Other aliasMOST1
HGNC (Hugo) C8orf17
LocusID (NCBI) 100507249
Atlas_Id 43727
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 139931172 and ends at 140170375 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)C8orf17   17737
Cards
Entrez_Gene (NCBI)C8orf17  100507249  chromosome 8 open reading frame 17
AliasesMOST-1; MOST1
GeneCards (Weizmann)C8orf17
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:139931172-140170375 [Contig_View]  C8orf17 [Vega]
TCGA cBioPortalC8orf17
AceView (NCBI)C8orf17
Genatlas (Paris)C8orf17
WikiGenes100507249
SOURCE (Princeton)C8orf17
Genetics Home Reference (NIH)C8orf17
Genomic and cartography
GoldenPath hg38 (UCSC)C8orf17  -     chr8:139931172-140170375 +  8q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C8orf17  -     8q24.3   [Description]    (hg19-Feb_2009)
EnsemblC8orf17 - 8q24.3 [CytoView hg19]  C8orf17 - 8q24.3 [CytoView hg38]
Mapping of homologs : NCBIC8orf17 [Mapview hg19]  C8orf17 [Mapview hg38]
OMIM616992   
Gene and transcription
Genbank (Entrez)AF220264
RefSeq transcript (Entrez)NM_020237
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C8orf17
Cluster EST : UnigeneHs.283098 [ NCBI ]
CGAP (NCI)Hs.283098
Gene ExpressionC8orf17 [ NCBI-GEO ]   C8orf17 [ EBI - ARRAY_EXPRESS ]   C8orf17 [ SEEK ]   C8orf17 [ MEM ]
Gene Expression Viewer (FireBrowse)C8orf17 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507249
GTEX Portal (Tissue expression)C8orf17
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NRJ1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NRJ1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NRJ1
Splice isoforms : SwissVarQ9NRJ1
PhosPhoSitePlusQ9NRJ1
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C8orf17
DMDM Disease mutations100507249
Blocks (Seattle)C8orf17
SuperfamilyQ9NRJ1
Peptide AtlasQ9NRJ1
IPIIPI00024969   
Protein Interaction databases
DIP (DOE-UCLA)Q9NRJ1
IntAct (EBI)Q9NRJ1
BioGRIDC8orf17
STRING (EMBL)C8orf17
ZODIACC8orf17
Ontologies - Pathways
QuickGOQ9NRJ1
Ontology : AmiGOendoplasmic reticulum membrane  organelle membrane  
Ontology : EGO-EBIendoplasmic reticulum membrane  organelle membrane  
NDEx NetworkC8orf17
Atlas of Cancer Signalling NetworkC8orf17
Wikipedia pathwaysC8orf17
Orthology - Evolution
OrthoDB100507249
Phylogenetic Trees/Animal Genes : TreeFamC8orf17
HOVERGENQ9NRJ1
HOGENOMQ9NRJ1
Homologs : HomoloGeneC8orf17
Homology/Alignments : Family Browser (UCSC)C8orf17
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC8orf17 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C8orf17
dbVarC8orf17
ClinVarC8orf17
1000_GenomesC8orf17 
Exome Variant ServerC8orf17
ExAC (Exome Aggregation Consortium)C8orf17 (select the gene name)
Genetic variants : HAPMAP100507249
Genomic Variants (DGV)C8orf17 [DGVbeta]
DECIPHERC8orf17 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC8orf17 
Mutations
ICGC Data PortalC8orf17 
TCGA Data PortalC8orf17 
Broad Tumor PortalC8orf17
OASIS PortalC8orf17 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDC8orf17
BioMutasearch C8orf17
DgiDB (Drug Gene Interaction Database)C8orf17
DoCM (Curated mutations)C8orf17 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C8orf17 (select a term)
intoGenC8orf17
Cancer3DC8orf17(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616992   
Orphanet
MedgenC8orf17
Genetic Testing Registry C8orf17
NextProtQ9NRJ1 [Medical]
TSGene100507249
GENETestsC8orf17
Target ValidationC8orf17
Huge Navigator C8orf17 [HugePedia]
snp3D : Map Gene to Disease100507249
BioCentury BCIQC8orf17
ClinGenC8orf17
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507249
Chemical/Pharm GKB GenePA25960
Clinical trialC8orf17
Miscellaneous
canSAR (ICR)C8orf17 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC8orf17
EVEXC8orf17
GoPubMedC8orf17
iHOPC8orf17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:00:05 CEST 2017

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