Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

C8orf31 (chromosome 8 open reading frame 31)

Identity

Alias_symbol (synonym)FLJ37131
Other alias-
HGNC (Hugo) C8orf31
LocusID (NCBI) 286122
Atlas_Id 61280
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 144120626 and ends at 144135720 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C8orf31   26731
Cards
Entrez_Gene (NCBI)C8orf31  286122  chromosome 8 open reading frame 31
Aliases
GeneCards (Weizmann)C8orf31
Ensembl hg19 (Hinxton) [Gene_View]  chr8:144120626-144135720 [Contig_View]  C8orf31 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:144120626-144135720 [Contig_View]  C8orf31 [Vega]
TCGA cBioPortalC8orf31
AceView (NCBI)C8orf31
Genatlas (Paris)C8orf31
WikiGenes286122
SOURCE (Princeton)C8orf31
Genetics Home Reference (NIH)C8orf31
Genomic and cartography
GoldenPath hg19 (UCSC)C8orf31  -     chr8:144120626-144135720 +  8q24.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C8orf31  -     8q24.3   [Description]    (hg38-Dec_2013)
EnsemblC8orf31 - 8q24.3 [CytoView hg19]  C8orf31 - 8q24.3 [CytoView hg38]
Mapping of homologs : NCBIC8orf31 [Mapview hg19]  C8orf31 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094450 BC063497 BC073830 BC120993 DB260703
RefSeq transcript (Entrez)NM_173687
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NT_187573 NW_004929340
Consensus coding sequences : CCDS (NCBI)C8orf31
Cluster EST : UnigeneHs.660382 [ NCBI ]
CGAP (NCI)Hs.660382
Gene ExpressionC8orf31 [ NCBI-GEO ]   C8orf31 [ EBI - ARRAY_EXPRESS ]   C8orf31 [ SEEK ]   C8orf31 [ MEM ]
Gene Expression Viewer (FireBrowse)C8orf31 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)286122
GTEX Portal (Tissue expression)C8orf31
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N9H6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N9H6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N9H6
Splice isoforms : SwissVarQ8N9H6
PhosPhoSitePlusQ8N9H6
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C8orf31
DMDM Disease mutations286122
Blocks (Seattle)C8orf31
SuperfamilyQ8N9H6
Peptide AtlasQ8N9H6
HPRD08781
IPIIPI00167724   IPI00853200   
Protein Interaction databases
DIP (DOE-UCLA)Q8N9H6
IntAct (EBI)Q8N9H6
BioGRIDC8orf31
STRING (EMBL)C8orf31
ZODIACC8orf31
Ontologies - Pathways
QuickGOQ8N9H6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC8orf31
Atlas of Cancer Signalling NetworkC8orf31
Wikipedia pathwaysC8orf31
Orthology - Evolution
OrthoDB286122
Phylogenetic Trees/Animal Genes : TreeFamC8orf31
HOVERGENQ8N9H6
HOGENOMQ8N9H6
Homologs : HomoloGeneC8orf31
Homology/Alignments : Family Browser (UCSC)C8orf31
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC8orf31 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C8orf31
dbVarC8orf31
ClinVarC8orf31
1000_GenomesC8orf31 
Exome Variant ServerC8orf31
ExAC (Exome Aggregation Consortium)C8orf31 (select the gene name)
Genetic variants : HAPMAP286122
Genomic Variants (DGV)C8orf31 [DGVbeta]
DECIPHER (Syndromes)8:144120626-144135720  
CONAN: Copy Number AnalysisC8orf31 
Mutations
ICGC Data PortalC8orf31 
TCGA Data PortalC8orf31 
Broad Tumor PortalC8orf31
OASIS PortalC8orf31 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC8orf31  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC8orf31
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C8orf31
DgiDB (Drug Gene Interaction Database)C8orf31
DoCM (Curated mutations)C8orf31 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C8orf31 (select a term)
intoGenC8orf31
Cancer3DC8orf31(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC8orf31
Genetic Testing Registry C8orf31
NextProtQ8N9H6 [Medical]
TSGene286122
GENETestsC8orf31
Huge Navigator C8orf31 [HugePedia]
snp3D : Map Gene to Disease286122
BioCentury BCIQC8orf31
ClinGenC8orf31
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286122
Chemical/Pharm GKB GenePA142672350
Clinical trialC8orf31
Miscellaneous
canSAR (ICR)C8orf31 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC8orf31
EVEXC8orf31
GoPubMedC8orf31
iHOPC8orf31
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:57:39 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.