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C8orf34-AS1 (C8orf34 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) C8orf34-AS1
LocusID (NCBI) 286189
Atlas_Id 76818
Location 8q13.2  [Link to chromosome band 8q13]
Location_base_pair Starts at 68303468 and ends at 68331491 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C8orf34-AS1   27840
Cards
Entrez_Gene (NCBI)C8orf34-AS1  286189  C8orf34 antisense RNA 1
Aliases
GeneCards (Weizmann)C8orf34-AS1
Ensembl hg19 (Hinxton)ENSG00000248801 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248801 [Gene_View]  chr8:68303468-68331491 [Contig_View]  C8orf34-AS1 [Vega]
ICGC DataPortalENSG00000248801
TCGA cBioPortalC8orf34-AS1
AceView (NCBI)C8orf34-AS1
Genatlas (Paris)C8orf34-AS1
WikiGenes286189
SOURCE (Princeton)C8orf34-AS1
Genetics Home Reference (NIH)C8orf34-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)C8orf34-AS1  -     chr8:68303468-68331491 -  8q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C8orf34-AS1  -     8q13.2   [Description]    (hg19-Feb_2009)
EnsemblC8orf34-AS1 - 8q13.2 [CytoView hg19]  C8orf34-AS1 - 8q13.2 [CytoView hg38]
Mapping of homologs : NCBIC8orf34-AS1 [Mapview hg19]  C8orf34-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092549 BC041480
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C8orf34-AS1
Cluster EST : UnigeneHs.593427 [ NCBI ]
CGAP (NCI)Hs.593427
Alternative Splicing GalleryENSG00000248801
Gene ExpressionC8orf34-AS1 [ NCBI-GEO ]   C8orf34-AS1 [ EBI - ARRAY_EXPRESS ]   C8orf34-AS1 [ SEEK ]   C8orf34-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)C8orf34-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)286189
GTEX Portal (Tissue expression)C8orf34-AS1
Human Protein AtlasENSG00000248801-C8orf34-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C8orf34-AS1
DMDM Disease mutations286189
Blocks (Seattle)C8orf34-AS1
Human Protein Atlas [tissue]ENSG00000248801-C8orf34-AS1 [tissue]
IPIIPI00790093   
Protein Interaction databases
FunCoupENSG00000248801
BioGRIDC8orf34-AS1
STRING (EMBL)C8orf34-AS1
ZODIACC8orf34-AS1
Ontologies - Pathways
Huge Navigator C8orf34-AS1 [HugePedia]
snp3D : Map Gene to Disease286189
BioCentury BCIQC8orf34-AS1
ClinGenC8orf34-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286189
Clinical trialC8orf34-AS1
Miscellaneous
canSAR (ICR)C8orf34-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC8orf34-AS1
EVEXC8orf34-AS1
GoPubMedC8orf34-AS1
iHOPC8orf34-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:17:53 CET 2017

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