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C8orf44-SGK3 (C8orf44-SGK3 readthrough)

Identity

Other alias-
HGNC (Hugo) C8orf44-SGK3
LocusID (NCBI) 100533105
Atlas_Id 56274
Location 8q13.1  [Link to chromosome band 8q13]
Location_base_pair Starts at 67579787 and ends at 67774257 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
SNX5 (20p11.23) / C8orf44-SGK3 (8q13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C8orf44-SGK3   48354
Cards
Entrez_Gene (NCBI)C8orf44-SGK3  100533105  C8orf44-SGK3 readthrough
Aliases
GeneCards (Weizmann)C8orf44-SGK3
Ensembl hg19 (Hinxton)ENSG00000270024 [Gene_View]  chr8:67579787-67774257 [Contig_View]  C8orf44-SGK3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000270024 [Gene_View]  chr8:67579787-67774257 [Contig_View]  C8orf44-SGK3 [Vega]
ICGC DataPortalENSG00000270024
TCGA cBioPortalC8orf44-SGK3
AceView (NCBI)C8orf44-SGK3
Genatlas (Paris)C8orf44-SGK3
WikiGenes100533105
SOURCE (Princeton)C8orf44-SGK3
Genetics Home Reference (NIH)C8orf44-SGK3
Genomic and cartography
GoldenPath hg19 (UCSC)C8orf44-SGK3  -     chr8:67579787-67774257 +  8q13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C8orf44-SGK3  -     8q13.1   [Description]    (hg38-Dec_2013)
EnsemblC8orf44-SGK3 - 8q13.1 [CytoView hg19]  C8orf44-SGK3 - 8q13.1 [CytoView hg38]
Mapping of homologs : NCBIC8orf44-SGK3 [Mapview hg19]  C8orf44-SGK3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001204173
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C8orf44-SGK3
Cluster EST : UnigeneHs.613417 [ NCBI ]
CGAP (NCI)Hs.613417
Alternative Splicing GalleryENSG00000270024
Gene ExpressionC8orf44-SGK3 [ NCBI-GEO ]   C8orf44-SGK3 [ EBI - ARRAY_EXPRESS ]   C8orf44-SGK3 [ SEEK ]   C8orf44-SGK3 [ MEM ]
Gene Expression Viewer (FireBrowse)C8orf44-SGK3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100533105
GTEX Portal (Tissue expression)C8orf44-SGK3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C8orf44-SGK3
DMDM Disease mutations100533105
Blocks (Seattle)C8orf44-SGK3
Human Protein AtlasENSG00000270024
Protein Interaction databases
FunCoupENSG00000270024
BioGRIDC8orf44-SGK3
STRING (EMBL)C8orf44-SGK3
ZODIACC8orf44-SGK3
Ontologies - Pathways
Huge Navigator C8orf44-SGK3 [HugePedia]
snp3D : Map Gene to Disease100533105
BioCentury BCIQC8orf44-SGK3
ClinGenC8orf44-SGK3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100533105
Clinical trialC8orf44-SGK3
Miscellaneous
canSAR (ICR)C8orf44-SGK3 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC8orf44-SGK3
EVEXC8orf44-SGK3
GoPubMedC8orf44-SGK3
iHOPC8orf44-SGK3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:54:42 CEST 2017

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