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C8orf60 (chromosome 8 open reading frame 60)

Identity

Other alias-
HGNC (Hugo) C8orf60
LocusID (NCBI) 619426
Atlas_Id 61290
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 142180498 and ends at 142183016 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)C8orf60   32274
Cards
Entrez_Gene (NCBI)C8orf60  619426  chromosome 8 open reading frame 60
Aliases
GeneCards (Weizmann)C8orf60
Ensembl hg19 (Hinxton) [Gene_View]  chr8:142180498-142183016 [Contig_View]  C8orf60 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:142180498-142183016 [Contig_View]  C8orf60 [Vega]
TCGA cBioPortalC8orf60
AceView (NCBI)C8orf60
Genatlas (Paris)C8orf60
WikiGenes619426
SOURCE (Princeton)C8orf60
Genetics Home Reference (NIH)C8orf60
Genomic and cartography
GoldenPath hg19 (UCSC)C8orf60  -     chr8:142180498-142183016 +  8q24.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C8orf60  -     8q24.3   [Description]    (hg38-Dec_2013)
EnsemblC8orf60 - 8q24.3 [CytoView hg19]  C8orf60 - 8q24.3 [CytoView hg38]
Mapping of homologs : NCBIC8orf60 [Mapview hg19]  C8orf60 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022255
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C8orf60
Gene ExpressionC8orf60 [ NCBI-GEO ]   C8orf60 [ EBI - ARRAY_EXPRESS ]   C8orf60 [ SEEK ]   C8orf60 [ MEM ]
Gene Expression Viewer (FireBrowse)C8orf60 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)619426
GTEX Portal (Tissue expression)C8orf60
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HA58   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HA58  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HA58
Splice isoforms : SwissVarQ9HA58
PhosPhoSitePlusQ9HA58
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C8orf60
DMDM Disease mutations619426
Blocks (Seattle)C8orf60
SuperfamilyQ9HA58
Peptide AtlasQ9HA58
IPIIPI00386912   
Protein Interaction databases
DIP (DOE-UCLA)Q9HA58
IntAct (EBI)Q9HA58
BioGRIDC8orf60
STRING (EMBL)C8orf60
ZODIACC8orf60
Ontologies - Pathways
QuickGOQ9HA58
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC8orf60
Atlas of Cancer Signalling NetworkC8orf60
Wikipedia pathwaysC8orf60
Orthology - Evolution
OrthoDB619426
Phylogenetic Trees/Animal Genes : TreeFamC8orf60
HOVERGENQ9HA58
HOGENOMQ9HA58
Homologs : HomoloGeneC8orf60
Homology/Alignments : Family Browser (UCSC)C8orf60
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC8orf60 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C8orf60
dbVarC8orf60
ClinVarC8orf60
1000_GenomesC8orf60 
Exome Variant ServerC8orf60
ExAC (Exome Aggregation Consortium)C8orf60 (select the gene name)
Genetic variants : HAPMAP619426
Genomic Variants (DGV)C8orf60 [DGVbeta]
DECIPHER (Syndromes)8:142180498-142183016  
CONAN: Copy Number AnalysisC8orf60 
Mutations
ICGC Data PortalC8orf60 
TCGA Data PortalC8orf60 
Broad Tumor PortalC8orf60
OASIS PortalC8orf60 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDC8orf60
BioMutasearch C8orf60
DgiDB (Drug Gene Interaction Database)C8orf60
DoCM (Curated mutations)C8orf60 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C8orf60 (select a term)
intoGenC8orf60
Cancer3DC8orf60(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC8orf60
Genetic Testing Registry C8orf60
NextProtQ9HA58 [Medical]
TSGene619426
GENETestsC8orf60
Huge Navigator C8orf60 [HugePedia]
snp3D : Map Gene to Disease619426
BioCentury BCIQC8orf60
ClinGenC8orf60
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD619426
Chemical/Pharm GKB GenePA142672323
Clinical trialC8orf60
Miscellaneous
canSAR (ICR)C8orf60 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC8orf60
EVEXC8orf60
GoPubMedC8orf60
iHOPC8orf60
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:57:41 CET 2017

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