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C8orf76 (chromosome 8 open reading frame 76)

Identity

Alias_symbol (synonym)FLJ14825
Other alias-
HGNC (Hugo) C8orf76
LocusID (NCBI) 84933
Atlas_Id 61292
Location 8q24.13  [Link to chromosome band 8q24]
Location_base_pair Starts at 123219956 and ends at 123241398 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C8orf76   25924
Cards
Entrez_Gene (NCBI)C8orf76  84933  chromosome 8 open reading frame 76
Aliases
GeneCards (Weizmann)C8orf76
Ensembl hg19 (Hinxton)ENSG00000189376 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189376 [Gene_View]  chr8:123219956-123241398 [Contig_View]  C8orf76 [Vega]
ICGC DataPortalENSG00000189376
TCGA cBioPortalC8orf76
AceView (NCBI)C8orf76
Genatlas (Paris)C8orf76
WikiGenes84933
SOURCE (Princeton)C8orf76
Genetics Home Reference (NIH)C8orf76
Genomic and cartography
GoldenPath hg38 (UCSC)C8orf76  -     chr8:123219956-123241398 -  8q24.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C8orf76  -     8q24.13   [Description]    (hg19-Feb_2009)
EnsemblC8orf76 - 8q24.13 [CytoView hg19]  C8orf76 - 8q24.13 [CytoView hg38]
Mapping of homologs : NCBIC8orf76 [Mapview hg19]  C8orf76 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK027731 AK222660 BC067796 DR156993 GD144749
RefSeq transcript (Entrez)NM_032847
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C8orf76
Cluster EST : UnigeneHs.707401 [ NCBI ]
CGAP (NCI)Hs.707401
Alternative Splicing GalleryENSG00000189376
Gene ExpressionC8orf76 [ NCBI-GEO ]   C8orf76 [ EBI - ARRAY_EXPRESS ]   C8orf76 [ SEEK ]   C8orf76 [ MEM ]
Gene Expression Viewer (FireBrowse)C8orf76 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84933
GTEX Portal (Tissue expression)C8orf76
Human Protein AtlasENSG00000189376-C8orf76 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96K31   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96K31  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96K31
Splice isoforms : SwissVarQ96K31
PhosPhoSitePlusQ96K31
Domains : Interpro (EBI)TPR-like_helical_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C8orf76
DMDM Disease mutations84933
Blocks (Seattle)C8orf76
SuperfamilyQ96K31
Human Protein Atlas [tissue]ENSG00000189376-C8orf76 [tissue]
Peptide AtlasQ96K31
HPRD08605
Protein Interaction databases
DIP (DOE-UCLA)Q96K31
IntAct (EBI)Q96K31
FunCoupENSG00000189376
BioGRIDC8orf76
STRING (EMBL)C8orf76
ZODIACC8orf76
Ontologies - Pathways
QuickGOQ96K31
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC8orf76
Atlas of Cancer Signalling NetworkC8orf76
Wikipedia pathwaysC8orf76
Orthology - Evolution
OrthoDB84933
GeneTree (enSembl)ENSG00000189376
Phylogenetic Trees/Animal Genes : TreeFamC8orf76
HOVERGENQ96K31
HOGENOMQ96K31
Homologs : HomoloGeneC8orf76
Homology/Alignments : Family Browser (UCSC)C8orf76
Gene fusions - Rearrangements
Tumor Fusion PortalC8orf76
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC8orf76 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C8orf76
dbVarC8orf76
ClinVarC8orf76
1000_GenomesC8orf76 
Exome Variant ServerC8orf76
ExAC (Exome Aggregation Consortium)ENSG00000189376
GNOMAD BrowserENSG00000189376
Genetic variants : HAPMAP84933
Genomic Variants (DGV)C8orf76 [DGVbeta]
DECIPHERC8orf76 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC8orf76 
Mutations
ICGC Data PortalC8orf76 
TCGA Data PortalC8orf76 
Broad Tumor PortalC8orf76
OASIS PortalC8orf76 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC8orf76  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC8orf76
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C8orf76
DgiDB (Drug Gene Interaction Database)C8orf76
DoCM (Curated mutations)C8orf76 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C8orf76 (select a term)
intoGenC8orf76
Cancer3DC8orf76(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETC8orf76
MedgenC8orf76
Genetic Testing Registry C8orf76
NextProtQ96K31 [Medical]
TSGene84933
GENETestsC8orf76
Target ValidationC8orf76
Huge Navigator C8orf76 [HugePedia]
snp3D : Map Gene to Disease84933
BioCentury BCIQC8orf76
ClinGenC8orf76
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84933
Chemical/Pharm GKB GenePA142672339
Clinical trialC8orf76
Miscellaneous
canSAR (ICR)C8orf76 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC8orf76
EVEXC8orf76
GoPubMedC8orf76
iHOPC8orf76
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:17:55 CET 2017

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