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CA14 (carbonic anhydrase 14)

Identity

Alias_namescarbonic anhydrase XIV
Other aliasCAXiV
HGNC (Hugo) CA14
LocusID (NCBI) 23632
Atlas_Id 61340
Location 1q21.2  [Link to chromosome band 1q21]
Location_base_pair Starts at 150257743 and ends at 150265078 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CA14 (1q21.2) / SSNA1 (9q34.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CA14   1372
Cards
Entrez_Gene (NCBI)CA14  23632  carbonic anhydrase 14
AliasesCAXiV
GeneCards (Weizmann)CA14
Ensembl hg19 (Hinxton)ENSG00000118298 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000118298 [Gene_View]  chr1:150257743-150265078 [Contig_View]  CA14 [Vega]
ICGC DataPortalENSG00000118298
TCGA cBioPortalCA14
AceView (NCBI)CA14
Genatlas (Paris)CA14
WikiGenes23632
SOURCE (Princeton)CA14
Genetics Home Reference (NIH)CA14
Genomic and cartography
GoldenPath hg38 (UCSC)CA14  -     chr1:150257743-150265078 +  1q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CA14  -     1q21.2   [Description]    (hg19-Feb_2009)
EnsemblCA14 - 1q21.2 [CytoView hg19]  CA14 - 1q21.2 [CytoView hg38]
Mapping of homologs : NCBICA14 [Mapview hg19]  CA14 [Mapview hg38]
OMIM604832   
Gene and transcription
Genbank (Entrez)AB025904 AK074765 AK290609 AK295341 AK308964
RefSeq transcript (Entrez)NM_012113
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CA14
Cluster EST : UnigeneHs.528988 [ NCBI ]
CGAP (NCI)Hs.528988
Alternative Splicing GalleryENSG00000118298
Gene ExpressionCA14 [ NCBI-GEO ]   CA14 [ EBI - ARRAY_EXPRESS ]   CA14 [ SEEK ]   CA14 [ MEM ]
Gene Expression Viewer (FireBrowse)CA14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23632
GTEX Portal (Tissue expression)CA14
Human Protein AtlasENSG00000118298-CA14 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9ULX7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9ULX7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9ULX7
Splice isoforms : SwissVarQ9ULX7
Catalytic activity : Enzyme4.2.1.1 [ Enzyme-Expasy ]   4.2.1.14.2.1.1 [ IntEnz-EBI ]   4.2.1.1 [ BRENDA ]   4.2.1.1 [ KEGG ]   
PhosPhoSitePlusQ9ULX7
Domaine pattern : Prosite (Expaxy)ALPHA_CA_2 (PS51144)   
Domains : Interpro (EBI)Carbonic_anhydrase_a    Carbonic_anhydrase_a-class    Carbonic_anhydrase_CA14   
Domain families : Pfam (Sanger)Carb_anhydrase (PF00194)   
Domain families : Pfam (NCBI)pfam00194   
Domain families : Smart (EMBL)Carb_anhydrase (SM01057)  
Conserved Domain (NCBI)CA14
DMDM Disease mutations23632
Blocks (Seattle)CA14
PDB (SRS)4LU3    5CJF   
PDB (PDBSum)4LU3    5CJF   
PDB (IMB)4LU3    5CJF   
PDB (RSDB)4LU3    5CJF   
Structural Biology KnowledgeBase4LU3    5CJF   
SCOP (Structural Classification of Proteins)4LU3    5CJF   
CATH (Classification of proteins structures)4LU3    5CJF   
SuperfamilyQ9ULX7
Human Protein Atlas [tissue]ENSG00000118298-CA14 [tissue]
Peptide AtlasQ9ULX7
HPRD05320
IPIIPI00008504   
Protein Interaction databases
DIP (DOE-UCLA)Q9ULX7
IntAct (EBI)Q9ULX7
FunCoupENSG00000118298
BioGRIDCA14
STRING (EMBL)CA14
ZODIACCA14
Ontologies - Pathways
QuickGOQ9ULX7
Ontology : AmiGOcarbonate dehydratase activity  plasma membrane  bicarbonate transport  integral component of membrane  metal ion binding  
Ontology : EGO-EBIcarbonate dehydratase activity  plasma membrane  bicarbonate transport  integral component of membrane  metal ion binding  
Pathways : KEGGNitrogen metabolism   
NDEx NetworkCA14
Atlas of Cancer Signalling NetworkCA14
Wikipedia pathwaysCA14
Orthology - Evolution
OrthoDB23632
GeneTree (enSembl)ENSG00000118298
Phylogenetic Trees/Animal Genes : TreeFamCA14
HOVERGENQ9ULX7
HOGENOMQ9ULX7
Homologs : HomoloGeneCA14
Homology/Alignments : Family Browser (UCSC)CA14
Gene fusions - Rearrangements
Fusion: Tumor Portal CA14
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCA14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CA14
dbVarCA14
ClinVarCA14
1000_GenomesCA14 
Exome Variant ServerCA14
ExAC (Exome Aggregation Consortium)ENSG00000118298
GNOMAD BrowserENSG00000118298
Genetic variants : HAPMAP23632
Genomic Variants (DGV)CA14 [DGVbeta]
DECIPHERCA14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCA14 
Mutations
ICGC Data PortalCA14 
TCGA Data PortalCA14 
Broad Tumor PortalCA14
OASIS PortalCA14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCA14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCA14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CA14
DgiDB (Drug Gene Interaction Database)CA14
DoCM (Curated mutations)CA14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CA14 (select a term)
intoGenCA14
Cancer3DCA14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604832   
Orphanet
MedgenCA14
Genetic Testing Registry CA14
NextProtQ9ULX7 [Medical]
TSGene23632
GENETestsCA14
Target ValidationCA14
Huge Navigator CA14 [HugePedia]
snp3D : Map Gene to Disease23632
BioCentury BCIQCA14
ClinGenCA14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23632
Chemical/Pharm GKB GenePA25988
Clinical trialCA14
Miscellaneous
canSAR (ICR)CA14 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCA14
EVEXCA14
GoPubMedCA14
iHOPCA14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:41:02 CET 2017

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