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CA3-AS1 (CA3 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) CA3-AS1
LocusID (NCBI) 100996348
Atlas_Id 66963
Location 8q21.2  [Link to chromosome band 8q21]
Location_base_pair Starts at 86354037 and ends at 86377144 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CA3-AS1   51657
Cards
Entrez_Gene (NCBI)CA3-AS1  100996348  CA3 antisense RNA 1
Aliases
GeneCards (Weizmann)CA3-AS1
Ensembl hg19 (Hinxton)ENSG00000253549 [Gene_View]  chr8:86354037-86377144 [Contig_View]  CA3-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000253549 [Gene_View]  chr8:86354037-86377144 [Contig_View]  CA3-AS1 [Vega]
ICGC DataPortalENSG00000253549
TCGA cBioPortalCA3-AS1
AceView (NCBI)CA3-AS1
Genatlas (Paris)CA3-AS1
WikiGenes100996348
SOURCE (Princeton)CA3-AS1
Genetics Home Reference (NIH)CA3-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)CA3-AS1  -     chr8:86354037-86377144 -  8q21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CA3-AS1  -     8q21.2   [Description]    (hg38-Dec_2013)
EnsemblCA3-AS1 - 8q21.2 [CytoView hg19]  CA3-AS1 - 8q21.2 [CytoView hg38]
Mapping of homologs : NCBICA3-AS1 [Mapview hg19]  CA3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW172333 AW611902 BM713112 BM717037 DA940436
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008183 NW_004929339
Consensus coding sequences : CCDS (NCBI)CA3-AS1
Cluster EST : UnigeneHs.606624 [ NCBI ]
CGAP (NCI)Hs.606624
Alternative Splicing GalleryENSG00000253549
Gene ExpressionCA3-AS1 [ NCBI-GEO ]   CA3-AS1 [ EBI - ARRAY_EXPRESS ]   CA3-AS1 [ SEEK ]   CA3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CA3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996348
GTEX Portal (Tissue expression)CA3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CA3-AS1
DMDM Disease mutations100996348
Blocks (Seattle)CA3-AS1
Human Protein AtlasENSG00000253549
Protein Interaction databases
FunCoupENSG00000253549
BioGRIDCA3-AS1
STRING (EMBL)CA3-AS1
ZODIACCA3-AS1
Ontologies - Pathways
Huge Navigator CA3-AS1 [HugePedia]
snp3D : Map Gene to Disease100996348
BioCentury BCIQCA3-AS1
ClinGenCA3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996348
Clinical trialCA3-AS1
Miscellaneous
canSAR (ICR)CA3-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCA3-AS1
EVEXCA3-AS1
GoPubMedCA3-AS1
iHOPCA3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 11:57:52 CET 2017

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