Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CABLES2 (Cdk5 and Abl enzyme substrate 2)

Identity

Alias_namesC20orf150
chromosome 20 open reading frame 150
Alias_symbol (synonym)dJ908M14.2
ik3-2
Other alias
HGNC (Hugo) CABLES2
LocusID (NCBI) 81928
Atlas_Id 61346
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 62388630 and ends at 62407283 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CABLES2 (20q13.33) / CABLES2 (20q13.33)LAMA5 (20q13.33) / CABLES2 (20q13.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CABLES2   16143
Cards
Entrez_Gene (NCBI)CABLES2  81928  Cdk5 and Abl enzyme substrate 2
AliasesC20orf150; dJ908M14.2; ik3-2
GeneCards (Weizmann)CABLES2
Ensembl hg19 (Hinxton)ENSG00000149679 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000149679 [Gene_View]  chr20:62388630-62407283 [Contig_View]  CABLES2 [Vega]
ICGC DataPortalENSG00000149679
TCGA cBioPortalCABLES2
AceView (NCBI)CABLES2
Genatlas (Paris)CABLES2
WikiGenes81928
SOURCE (Princeton)CABLES2
Genetics Home Reference (NIH)CABLES2
Genomic and cartography
GoldenPath hg38 (UCSC)CABLES2  -     chr20:62388630-62407283 -  20q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CABLES2  -     20q13.33   [Description]    (hg19-Feb_2009)
EnsemblCABLES2 - 20q13.33 [CytoView hg19]  CABLES2 - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBICABLES2 [Mapview hg19]  CABLES2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI066606 BC003122 BC011196 BC169247 BC169248
RefSeq transcript (Entrez)NM_031215
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CABLES2
Cluster EST : UnigeneHs.301040 [ NCBI ]
CGAP (NCI)Hs.301040
Alternative Splicing GalleryENSG00000149679
Gene ExpressionCABLES2 [ NCBI-GEO ]   CABLES2 [ EBI - ARRAY_EXPRESS ]   CABLES2 [ SEEK ]   CABLES2 [ MEM ]
Gene Expression Viewer (FireBrowse)CABLES2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)81928
GTEX Portal (Tissue expression)CABLES2
Human Protein AtlasENSG00000149679-CABLES2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BTV7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BTV7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BTV7
Splice isoforms : SwissVarQ9BTV7
PhosPhoSitePlusQ9BTV7
Domains : Interpro (EBI)CABLES1/2    Cyclin-like    Cyclin_N   
Domain families : Pfam (Sanger)Cyclin_N (PF00134)   
Domain families : Pfam (NCBI)pfam00134   
Conserved Domain (NCBI)CABLES2
DMDM Disease mutations81928
Blocks (Seattle)CABLES2
SuperfamilyQ9BTV7
Human Protein Atlas [tissue]ENSG00000149679-CABLES2 [tissue]
Peptide AtlasQ9BTV7
HPRD12994
IPIIPI00030512   IPI00748758   
Protein Interaction databases
DIP (DOE-UCLA)Q9BTV7
IntAct (EBI)Q9BTV7
FunCoupENSG00000149679
BioGRIDCABLES2
STRING (EMBL)CABLES2
ZODIACCABLES2
Ontologies - Pathways
QuickGOQ9BTV7
Ontology : AmiGOcell cycle  cell division  regulation of cell cycle  
Ontology : EGO-EBIcell cycle  cell division  regulation of cell cycle  
NDEx NetworkCABLES2
Atlas of Cancer Signalling NetworkCABLES2
Wikipedia pathwaysCABLES2
Orthology - Evolution
OrthoDB81928
GeneTree (enSembl)ENSG00000149679
Phylogenetic Trees/Animal Genes : TreeFamCABLES2
HOVERGENQ9BTV7
HOGENOMQ9BTV7
Homologs : HomoloGeneCABLES2
Homology/Alignments : Family Browser (UCSC)CABLES2
Gene fusions - Rearrangements
Tumor Fusion PortalCABLES2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCABLES2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CABLES2
dbVarCABLES2
ClinVarCABLES2
1000_GenomesCABLES2 
Exome Variant ServerCABLES2
ExAC (Exome Aggregation Consortium)ENSG00000149679
GNOMAD BrowserENSG00000149679
Genetic variants : HAPMAP81928
Genomic Variants (DGV)CABLES2 [DGVbeta]
DECIPHERCABLES2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCABLES2 
Mutations
ICGC Data PortalCABLES2 
TCGA Data PortalCABLES2 
Broad Tumor PortalCABLES2
OASIS PortalCABLES2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCABLES2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCABLES2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CABLES2
DgiDB (Drug Gene Interaction Database)CABLES2
DoCM (Curated mutations)CABLES2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CABLES2 (select a term)
intoGenCABLES2
Cancer3DCABLES2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCABLES2
MedgenCABLES2
Genetic Testing Registry CABLES2
NextProtQ9BTV7 [Medical]
TSGene81928
GENETestsCABLES2
Target ValidationCABLES2
Huge Navigator CABLES2 [HugePedia]
snp3D : Map Gene to Disease81928
BioCentury BCIQCABLES2
ClinGenCABLES2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD81928
Chemical/Pharm GKB GenePA25692
Clinical trialCABLES2
Miscellaneous
canSAR (ICR)CABLES2 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCABLES2
EVEXCABLES2
GoPubMedCABLES2
iHOPCABLES2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:41:17 CET 2017

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