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CACNA1C-AS1 (CACNA1C antisense RNA 1)

Identity

Alias_namesCACNA1C antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) CACNA1C-AS1
LocusID (NCBI) 100652846
Atlas_Id 61357
Location 12p13.33  [Link to chromosome band 12p13]
Location_base_pair Starts at 2785167 and ends at 2800323 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CACNA1C-AS1   40119
Cards
Entrez_Gene (NCBI)CACNA1C-AS1  100652846  CACNA1C antisense RNA 1
Aliases
GeneCards (Weizmann)CACNA1C-AS1
Ensembl hg19 (Hinxton)ENSG00000246627 [Gene_View]  chr12:2785167-2800323 [Contig_View]  CACNA1C-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000246627 [Gene_View]  chr12:2785167-2800323 [Contig_View]  CACNA1C-AS1 [Vega]
ICGC DataPortalENSG00000246627
TCGA cBioPortalCACNA1C-AS1
AceView (NCBI)CACNA1C-AS1
Genatlas (Paris)CACNA1C-AS1
WikiGenes100652846
SOURCE (Princeton)CACNA1C-AS1
Genetics Home Reference (NIH)CACNA1C-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)CACNA1C-AS1  -     chr12:2785167-2800323 -  12p13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CACNA1C-AS1  -     12p13.33   [Description]    (hg38-Dec_2013)
EnsemblCACNA1C-AS1 - 12p13.33 [CytoView hg19]  CACNA1C-AS1 - 12p13.33 [CytoView hg38]
Mapping of homologs : NCBICACNA1C-AS1 [Mapview hg19]  CACNA1C-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093746 DB156888 HG504398 HG504399 HG504400
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000012 NC_018923 NG_008801 NT_009759 NW_004929382
Consensus coding sequences : CCDS (NCBI)CACNA1C-AS1
Cluster EST : UnigeneHs.683896 [ NCBI ]
CGAP (NCI)Hs.683896
Alternative Splicing GalleryENSG00000246627
Gene ExpressionCACNA1C-AS1 [ NCBI-GEO ]   CACNA1C-AS1 [ EBI - ARRAY_EXPRESS ]   CACNA1C-AS1 [ SEEK ]   CACNA1C-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CACNA1C-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100652846
GTEX Portal (Tissue expression)CACNA1C-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CACNA1C-AS1
DMDM Disease mutations100652846
Blocks (Seattle)CACNA1C-AS1
Human Protein AtlasENSG00000246627
Protein Interaction databases
FunCoupENSG00000246627
BioGRIDCACNA1C-AS1
STRING (EMBL)CACNA1C-AS1
ZODIACCACNA1C-AS1
Ontologies - Pathways
Huge Navigator CACNA1C-AS1 [HugePedia]
snp3D : Map Gene to Disease100652846
BioCentury BCIQCACNA1C-AS1
ClinGenCACNA1C-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100652846
Clinical trialCACNA1C-AS1
Miscellaneous
canSAR (ICR)CACNA1C-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCACNA1C-AS1
EVEXCACNA1C-AS1
GoPubMedCACNA1C-AS1
iHOPCACNA1C-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:57:55 CET 2017

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