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CACNA1G (calcium voltage-gated channel subunit alpha1 G)

Identity

Alias (NCBI)Ca(V)T.1
Cav3.1
NBR13
SCA42
SCA42ND
HGNC (Hugo) CACNA1G
HGNC Alias symbCav3.1
NBR13
HGNC Previous namecalcium channel, voltage-dependent, T type, alpha 1G subunit
LocusID (NCBI) 8913
Atlas_Id 901
Location 17q21.33  [Link to chromosome band 17q21]
Location_base_pair Starts at 50561068 and ends at 50627471 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CACNA1G (17q21.33) / CDK18 (1q32.1)CACNA1G (17q21.33) / OBP2B (9q34.2)CACNA1G (17q21.33) / TATDN2 (3p25.3)
NF1 (17q11.2) / CACNA1G (17q21.33)ZNF585B (19q13.12) / CACNA1G (17q21.33)NF1 17q11.2 / CACNA1G 17q21.33
ZNF585B 19q13.12 / CACNA1G 17q21.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CACNA1G   1394
Cards
Entrez_Gene (NCBI)CACNA1G    calcium voltage-gated channel subunit alpha1 G
AliasesCa(V)T.1; Cav3.1; NBR13; SCA42; 
SCA42ND
GeneCards (Weizmann)CACNA1G
Ensembl hg19 (Hinxton)ENSG00000006283 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000006283 [Gene_View]  ENSG00000006283 [Sequence]  chr17:50561068-50627471 [Contig_View]  CACNA1G [Vega]
ICGC DataPortalENSG00000006283
TCGA cBioPortalCACNA1G
AceView (NCBI)CACNA1G
Genatlas (Paris)CACNA1G
SOURCE (Princeton)CACNA1G
Genetics Home Reference (NIH)CACNA1G
Genomic and cartography
GoldenPath hg38 (UCSC)CACNA1G  -     chr17:50561068-50627471 +  17q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CACNA1G  -     17q21.33   [Description]    (hg19-Feb_2009)
GoldenPathCACNA1G - 17q21.33 [CytoView hg19]  CACNA1G - 17q21.33 [CytoView hg38]
ImmunoBaseENSG00000006283
Genome Data Viewer NCBICACNA1G [Mapview hg19]  
OMIM604065   616795   618087   
Gene and transcription
Genbank (Entrez)AB012043 AB032949 AF124351 AF126965 AF126966
RefSeq transcript (Entrez)NM_001256324 NM_001256325 NM_001256326 NM_001256327 NM_001256328 NM_001256329 NM_001256330 NM_001256331 NM_001256332 NM_001256333 NM_001256334 NM_001256359 NM_001256360 NM_001256361 NM_018896 NM_198376 NM_198377 NM_198378 NM_198379 NM_198380 NM_198382 NM_198383 NM_198384 NM_198385 NM_198386 NM_198387 NM_198388 NM_198396 NM_198397
Consensus coding sequences : CCDS (NCBI)CACNA1G
Gene ExpressionCACNA1G [ NCBI-GEO ]   CACNA1G [ EBI - ARRAY_EXPRESS ]   CACNA1G [ SEEK ]   CACNA1G [ MEM ]
Gene Expression Viewer (FireBrowse)CACNA1G [ Firebrowse - Broad ]
GenevisibleExpression of CACNA1G in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8913
GTEX Portal (Tissue expression)CACNA1G
Human Protein AtlasENSG00000006283-CACNA1G [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CACNA1G
Human Protein Atlas [tissue]ENSG00000006283-CACNA1G [tissue]
HPRD04961
Protein Interaction databases
BioGRIDCACNA1G
STRING (EMBL)CACNA1G
ZODIACCACNA1G
Ontologies - Pathways
Litterature
PubMed65 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCACNA1G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:01:58 CEST 2021

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