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CADM2-AS2 (CADM2 antisense RNA 2)

Identity

Alias_namesCADM2 antisense RNA 2 (non-protein coding)
Other alias-
HGNC (Hugo) CADM2-AS2
LocusID (NCBI) 100874037
Atlas_Id 61381
Location 3p12.1  [Link to chromosome band 3p12]
Location_base_pair Starts at 85799987 and ends at 85828050 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CADM2-AS2   41247
Cards
Entrez_Gene (NCBI)CADM2-AS2  100874037  CADM2 antisense RNA 2
Aliases
GeneCards (Weizmann)CADM2-AS2
Ensembl hg19 (Hinxton)ENSG00000241648 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241648 [Gene_View]  chr3:85799987-85828050 [Contig_View]  CADM2-AS2 [Vega]
ICGC DataPortalENSG00000241648
TCGA cBioPortalCADM2-AS2
AceView (NCBI)CADM2-AS2
Genatlas (Paris)CADM2-AS2
WikiGenes100874037
SOURCE (Princeton)CADM2-AS2
Genetics Home Reference (NIH)CADM2-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)CADM2-AS2  -     chr3:85799987-85828050 -  3p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CADM2-AS2  -     3p12.1   [Description]    (hg19-Feb_2009)
EnsemblCADM2-AS2 - 3p12.1 [CytoView hg19]  CADM2-AS2 - 3p12.1 [CytoView hg38]
Mapping of homologs : NCBICADM2-AS2 [Mapview hg19]  CADM2-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG200721
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CADM2-AS2
Cluster EST : UnigeneHs.570566 [ NCBI ]
CGAP (NCI)Hs.570566
Alternative Splicing GalleryENSG00000241648
Gene ExpressionCADM2-AS2 [ NCBI-GEO ]   CADM2-AS2 [ EBI - ARRAY_EXPRESS ]   CADM2-AS2 [ SEEK ]   CADM2-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)CADM2-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874037
GTEX Portal (Tissue expression)CADM2-AS2
Human Protein AtlasENSG00000241648-CADM2-AS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CADM2-AS2
DMDM Disease mutations100874037
Blocks (Seattle)CADM2-AS2
Human Protein Atlas [tissue]ENSG00000241648-CADM2-AS2 [tissue]
Protein Interaction databases
FunCoupENSG00000241648
BioGRIDCADM2-AS2
STRING (EMBL)CADM2-AS2
ZODIACCADM2-AS2
Ontologies - Pathways
Huge Navigator CADM2-AS2 [HugePedia]
snp3D : Map Gene to Disease100874037
BioCentury BCIQCADM2-AS2
ClinGenCADM2-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874037
Clinical trialCADM2-AS2
Miscellaneous
canSAR (ICR)CADM2-AS2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCADM2-AS2
EVEXCADM2-AS2
GoPubMedCADM2-AS2
iHOPCADM2-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:07:07 CET 2017

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