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CADPS2 (calcium dependent secretion activator 2)

Identity

Alias (NCBI)CAPS2
HGNC (Hugo) CADPS2
HGNC Alias symbCAPS2
HGNC Previous nameCa++-dependent activator protein for secretion 2
 Ca2+ dependent secretion activator 2
LocusID (NCBI) 93664
Atlas_Id 61383
Location 7q31.32  [Link to chromosome band 7q31]
Location_base_pair Starts at 122318411 and ends at 122886460 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CADPS2 (7q31.32) / ARMCX6 (Xq22.1)CADPS2 (7q31.32) / DHCR7 (11q13.4)CADPS2 (7q31.32) / LMOD2 (7q31.32)
CADPS2 (7q31.32) / LOC440354 ()DENND1A (9q33.3) / CADPS2 (7q31.32)IL6R (1q21.3) / CADPS2 (7q31.32)
SPTAN1 (9q34.11) / CADPS2 (7q31.32)CADPS2 LMOD2CADPS2 DHCR7
DENND1A CADPS2SPTAN1 CADPS2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CADPS2   16018
Cards
Entrez_Gene (NCBI)CADPS2    calcium dependent secretion activator 2
AliasesCAPS2
GeneCards (Weizmann)CADPS2
Ensembl hg19 (Hinxton)ENSG00000081803 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000081803 [Gene_View]  ENSG00000081803 [Sequence]  chr7:122318411-122886460 [Contig_View]  CADPS2 [Vega]
ICGC DataPortalENSG00000081803
TCGA cBioPortalCADPS2
AceView (NCBI)CADPS2
Genatlas (Paris)CADPS2
SOURCE (Princeton)CADPS2
Genetics Home Reference (NIH)CADPS2
Genomic and cartography
GoldenPath hg38 (UCSC)CADPS2  -     chr7:122318411-122886460 -  7q31.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CADPS2  -     7q31.32   [Description]    (hg19-Feb_2009)
GoldenPathCADPS2 - 7q31.32 [CytoView hg19]  CADPS2 - 7q31.32 [CytoView hg38]
ImmunoBaseENSG00000081803
Genome Data Viewer NCBICADPS2 [Mapview hg19]  
OMIM609978   
Gene and transcription
Genbank (Entrez)AB046811 AF401638 AK000768 AK025672 AK054853
RefSeq transcript (Entrez)NM_001009571 NM_001167940 NM_001363389 NM_001363390 NM_001363391 NM_001363392 NM_001363393 NM_001363394 NM_001363395 NM_001363396 NM_001363397 NM_001363398 NM_001363399 NM_001363400 NM_017954
Consensus coding sequences : CCDS (NCBI)CADPS2
Gene ExpressionCADPS2 [ NCBI-GEO ]   CADPS2 [ EBI - ARRAY_EXPRESS ]   CADPS2 [ SEEK ]   CADPS2 [ MEM ]
Gene Expression Viewer (FireBrowse)CADPS2 [ Firebrowse - Broad ]
GenevisibleExpression of CADPS2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93664
GTEX Portal (Tissue expression)CADPS2
Human Protein AtlasENSG00000081803-CADPS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CADPS2
Human Protein Atlas [tissue]ENSG00000081803-CADPS2 [tissue]
HPRD12996
Protein Interaction databases
BioGRIDCADPS2
STRING (EMBL)CADPS2
ZODIACCADPS2
Ontologies - Pathways
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCADPS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:44:41 CEST 2021

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