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CALM1 (calmodulin 1)

Identity

Alias (NCBI)CALML2
CAM2
CAM3
CAMB
CAMC
CAMI
CAMIII
CPVT4
DD132
LQT14
PHKD
caM
HGNC (Hugo) CALM1
HGNC Alias symbCAMI
PHKD
DD132
HGNC Alias nameprepro-calmodulin 1
 phosphorylase kinase subunit delta
HGNC Previous nameCALML2
HGNC Previous namecalmodulin 1 (phosphorylase kinase, delta)
LocusID (NCBI) 801
Atlas_Id 903
Location 14q32.11  [Link to chromosome band 14q32]
Location_base_pair Starts at 90397029 and ends at 90408268 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AIMP1 (4q24) / CALM1 (14q32.11)CACNA1B (9q34.3) / CALM1 (14q32.11)CALM1 (14q32.11) / ABI2 (2q33.2)
CALM1 (14q32.11) / CALM1 (14q32.11)CALM1 (14q32.11) / CANX (5q35.3)CALM1 (14q32.11) / MGP (12p12.3)
CALM1 (14q32.11) / MINK1 (17p13.2)CALM1 (14q32.11) / PSME3 (17q21.31)CALM1 (14q32.11) / RALA (7p14.1)
CALM1 (14q32.11) / UNC5CL (6p21.1)CERS2 (1q21.3) / CALM1 (14q32.11)DCXR (17q25.3) / CALM1 (14q32.11)
FSCN1 (7p22.1) / CALM1 (14q32.11)HN1 (17q25.1) / CALM1 (14q32.11)IRF2BP2 (1q42.3) / CALM1 (14q32.11)
NRDE2 (14q32.11) / CALM1 (14q32.11)STAU1 (20q13.13) / CALM1 (14q32.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CALM1   1442
Cards
Entrez_Gene (NCBI)CALM1    calmodulin 1
AliasesCALML2; CAM2; CAM3; CAMB; 
CAMC; CAMI; CAMIII; CPVT4; DD132; LQT14; PHKD; caM
GeneCards (Weizmann)CALM1
Ensembl hg19 (Hinxton)ENSG00000198668 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198668 [Gene_View]  ENSG00000198668 [Sequence]  chr14:90397029-90408268 [Contig_View]  CALM1 [Vega]
ICGC DataPortalENSG00000198668
TCGA cBioPortalCALM1
AceView (NCBI)CALM1
Genatlas (Paris)CALM1
SOURCE (Princeton)CALM1
Genetics Home Reference (NIH)CALM1
Genomic and cartography
GoldenPath hg38 (UCSC)CALM1  -     chr14:90397029-90408268 +  14q32.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CALM1  -     14q32.11   [Description]    (hg19-Feb_2009)
GoldenPathCALM1 - 14q32.11 [CytoView hg19]  CALM1 - 14q32.11 [CytoView hg38]
ImmunoBaseENSG00000198668
Genome Data Viewer NCBICALM1 [Mapview hg19]  
OMIM114180   614916   616247   
Gene and transcription
Genbank (Entrez)AH005375 AI651063 AK289937 AU122722 AY189287
RefSeq transcript (Entrez)NM_001166106 NM_001363669 NM_001363670 NM_006888
Consensus coding sequences : CCDS (NCBI)CALM1
Gene ExpressionCALM1 [ NCBI-GEO ]   CALM1 [ EBI - ARRAY_EXPRESS ]   CALM1 [ SEEK ]   CALM1 [ MEM ]
Gene Expression Viewer (FireBrowse)CALM1 [ Firebrowse - Broad ]
GenevisibleExpression of CALM1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)801
GTEX Portal (Tissue expression)CALM1
Human Protein AtlasENSG00000198668-CALM1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CALM1
Human Protein Atlas [tissue]ENSG00000198668-CALM1 [tissue]
HPRD00241
Protein Interaction databases
BioGRIDCALM1
STRING (EMBL)CALM1
ZODIACCALM1
Ontologies - Pathways
Litterature
PubMed499 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCALM1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:02:04 CEST 2021
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