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CALM2 (calmodulin 2)

Identity

Alias_namescalmodulin 2 (phosphorylase kinase
Alias_symbol (synonym)PHKD
CAMII
Other aliasCALM
CALML2
CAM1
CAM3
CAMC
CAMIII
LQT15
PHKD2
caM
HGNC (Hugo) CALM2
LocusID (NCBI) 805
Atlas_Id 54927
Location 2p21  [Link to chromosome band 2p21]
Location_base_pair Starts at 47160082 and ends at 47176623 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CALM2 (2p21) / BTAF1 (10q23.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CALM2   1445
Cards
Entrez_Gene (NCBI)CALM2  805  calmodulin 2
AliasesCALM; CALML2; CAM1; CAM3; 
CAMC; CAMII; CAMIII; LQT15; PHKD; PHKD2; caM
GeneCards (Weizmann)CALM2
Ensembl hg19 (Hinxton)ENSG00000143933 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000143933 [Gene_View]  ENSG00000143933 [Sequence]  chr2:47160082-47176623 [Contig_View]  CALM2 [Vega]
ICGC DataPortalENSG00000143933
TCGA cBioPortalCALM2
AceView (NCBI)CALM2
Genatlas (Paris)CALM2
WikiGenes805
SOURCE (Princeton)CALM2
Genetics Home Reference (NIH)CALM2
Genomic and cartography
GoldenPath hg38 (UCSC)CALM2  -     chr2:47160082-47176623 -  2p21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CALM2  -     2p21   [Description]    (hg19-Feb_2009)
EnsemblCALM2 - 2p21 [CytoView hg19]  CALM2 - 2p21 [CytoView hg38]
Mapping of homologs : NCBICALM2 [Mapview hg19]  CALM2 [Mapview hg38]
OMIM114182   616249   
Gene and transcription
Genbank (Entrez)AI873701 AK055130 AK315694 BC003354 BC006464
RefSeq transcript (Entrez)NM_001305624 NM_001305625 NM_001305626 NM_001743
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CALM2
Cluster EST : UnigeneHs.468442 [ NCBI ]
CGAP (NCI)Hs.468442
Alternative Splicing GalleryENSG00000143933
Gene ExpressionCALM2 [ NCBI-GEO ]   CALM2 [ EBI - ARRAY_EXPRESS ]   CALM2 [ SEEK ]   CALM2 [ MEM ]
Gene Expression Viewer (FireBrowse)CALM2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)805
GTEX Portal (Tissue expression)CALM2
Human Protein AtlasENSG00000143933-CALM2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CALM2
DMDM Disease mutations805
Blocks (Seattle)CALM2
Human Protein Atlas [tissue]ENSG00000143933-CALM2 [tissue]
HPRD00242
IPIIPI00075248   IPI00794543   IPI00386621   IPI01025684   IPI00945782   IPI01025362   IPI00915959   IPI00984320   IPI00916600   
Protein Interaction databases
FunCoupENSG00000143933
BioGRIDCALM2
STRING (EMBL)CALM2
ZODIACCALM2
Ontologies - Pathways
Huge Navigator CALM2 [HugePedia]
snp3D : Map Gene to Disease805
BioCentury BCIQCALM2
ClinGenCALM2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD805
Chemical/Pharm GKB GenePA26038
Clinical trialCALM2
Miscellaneous
canSAR (ICR)CALM2 (select the gene name)
Probes
Litterature
PubMed157 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCALM2
EVEXCALM2
GoPubMedCALM2
iHOPCALM2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 10:55:28 CET 2018

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