Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CALML3-AS1 (CALML3 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) CALML3-AS1
LocusID (NCBI) 100132159
Atlas_Id 61391
Location 10p15.1  [Link to chromosome band 10p15]
Location_base_pair Starts at 5514244 and ends at 5526246 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CALML3-AS1   44682
Cards
Entrez_Gene (NCBI)CALML3-AS1  100132159  CALML3 antisense RNA 1
Aliases
GeneCards (Weizmann)CALML3-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:5514244-5526246 [Contig_View]  CALML3-AS1 [Vega]
TCGA cBioPortalCALML3-AS1
AceView (NCBI)CALML3-AS1
Genatlas (Paris)CALML3-AS1
WikiGenes100132159
SOURCE (Princeton)CALML3-AS1
Genetics Home Reference (NIH)CALML3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CALML3-AS1  -     chr10:5514244-5526246 -  10p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CALML3-AS1  -     10p15.1   [Description]    (hg19-Feb_2009)
EnsemblCALML3-AS1 - 10p15.1 [CytoView hg19]  CALML3-AS1 - 10p15.1 [CytoView hg38]
Mapping of homologs : NCBICALML3-AS1 [Mapview hg19]  CALML3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128534 AL831877 DA220455 DA770774
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CALML3-AS1
Cluster EST : UnigeneHs.738690 [ NCBI ]
CGAP (NCI)Hs.738690
Gene ExpressionCALML3-AS1 [ NCBI-GEO ]   CALML3-AS1 [ EBI - ARRAY_EXPRESS ]   CALML3-AS1 [ SEEK ]   CALML3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CALML3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100132159
GTEX Portal (Tissue expression)CALML3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CALML3-AS1
DMDM Disease mutations100132159
Blocks (Seattle)CALML3-AS1
IPIIPI00443506   
Protein Interaction databases
BioGRIDCALML3-AS1
STRING (EMBL)CALML3-AS1
ZODIACCALML3-AS1
Ontologies - Pathways
Huge Navigator CALML3-AS1 [HugePedia]
snp3D : Map Gene to Disease100132159
BioCentury BCIQCALML3-AS1
ClinGenCALML3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132159
Clinical trialCALML3-AS1
Miscellaneous
canSAR (ICR)CALML3-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCALML3-AS1
EVEXCALML3-AS1
GoPubMedCALML3-AS1
iHOPCALML3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:03:48 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.