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CALML4 (calmodulin-like 4)

Identity

Other namesNY-BR-20
HGNC (Hugo) CALML4
LocusID (NCBI) 91860
Location 15q23
Location_base_pair Starts at 68483043 and ends at 68498448 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CALML4   18445
Entrez_Gene (NCBI)CALML4  91860  calmodulin-like 4
Cards
GeneCards (Weizmann)CALML4
Ensembl (Hinxton) [Gene_View]  chr15:68483043-68498448 [Contig_View]  CALML4 [Vega]
AceView (NCBI)CALML4
Genatlas (Paris)CALML4
SOURCE (Stanford)NM_001031733 NM_033429
Genomic and cartography
GoldenPath (UCSC)CALML4  -  15q23   chr15:68483043-68498448 -  15q23   [Description]    (hg19-Feb_2009)
EnsemblCALML4 - 15q23 [CytoView]
Mapping of homologs : NCBICALML4 [Mapview]
Gene and transcription
Genbank (Entrez)AF308287 AK092628 AK296804 BC009516 BC015215
RefSeq transcript (SRS)NM_001031733 NM_033429
RefSeq transcript (Entrez)NM_001031733 NM_033429
RefSeq genomic (SRS)AC_000147 NC_000015 NC_018926 NT_010194 NW_001838218 NW_004078084
RefSeq genomic (Entrez)AC_000147 NC_000015 NC_018926 NT_010194 NW_001838218 NW_004078084
Consensus coding sequences : CCDS (NCBI)CALML4
Cluster EST : UnigeneHs.709550 [ SRS ] Hs.709550 [ NCBI ]
CGAP (NCI)Hs.709550
Alternative Splicing : Fast-db (Paris)GSHG0010540
Gene ExpressionCALML4 [ NCBI-GEO ]   CALML4 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96GE6 (SRS) Q96GE6 (Uniprot)
NextProtQ96GE6
With graphics : InterProQ96GE6
Splice isoforms : SwissVarQ96GE6(Swissvar)
Domaine pattern : Prosite (SRS)EF_HAND_2 (PS50222)   
Domaine pattern : Prosite (Expaxy)EF_HAND_2 (PS50222)   
Domains : Interpro (SRS)EF-hand-like_dom    EF_hand_dom   
Domains : Interpro (EBI)EF-hand-like_dom    EF_hand_dom   
Related proteins : CluSTrQ96GE6
Domain families : Pfam (SRS)EF_hand_5 (PF13499)   
Domain families : Pfam (Sanger)EF_hand_5 (PF13499)   
Domain families : Pfam (NCBI)pfam13499   
Domain families : Smart (EMBL)EFh (SM00054)  
DMDM91860
Blocks (Seattle)Q96GE6
HPRD12998
IPIIPI00478437   IPI00791138   IPI00789951   IPI00852704   IPI00853344   
Protein Interaction databases
DIP (DOE-UCLA)Q96GE6
IntAct (EBI)Q96GE6
REACTOMECALML4
Protein Interaction Database91860
BioGRIDCALML4
InParanoidQ96GE6
Interologous Interaction database Q96GE6
IntegromeDBCALML4
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CALML4
SNP (GeneSNP Utah)CALML4
SNP : HGBaseCALML4
Genetic variants : HAPMAPCALML4
Somatic Mutations in Cancer : COSMICCALML4 
CONAN: Copy Number AnalysisCALML4 
Mutations and Diseases : HGMDCALML4
OMIM
GENETests
Disease Genetic AssociationCALML4
Huge Navigator CALML4 [HugePedia]  CALML4 [HugeCancerGEM]
Genomic VariantsCALML4  CALML4 [DGVbeta]
ClinVarCALML4
snp3D : Map Gene to Disease91860
General knowledge
Homologs : HomoloGeneCALML4
Homology/Alignments : Family Browser (UCSC)CALML4
Phylogenetic Trees/Animal Genes : TreeFamCALML4
Chemical/Protein Interactions : CTD91860
Chemical/Pharm GKB GenePA134903345
Clinical trialCALML4
Ontology : AmiGOcalcium ion binding  
Ontology : EGO-EBIcalcium ion binding  
Other databases
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
PubGeneCALML4
iHOPCALML4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:39:22 CEST 2013
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