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CALML4 (calmodulin-like 4)

Identity

Other namesNY-BR-20
HGNC (Hugo) CALML4
LocusID (NCBI) 91860
Location 15q23
Location_base_pair Starts at 68483043 and ends at 68498448 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CALML4   18445
Cards
Entrez_Gene (NCBI)CALML4  91860  calmodulin-like 4
GeneCards (Weizmann)CALML4
Ensembl (Hinxton) [Gene_View]  chr15:68483043-68498448 [Contig_View]  CALML4 [Vega]
cBioPortalCALML4
AceView (NCBI)CALML4
Genatlas (Paris)CALML4
WikiGenes91860
SOURCE (Princeton)NM_001031733 NM_001286694 NM_001286695 NM_033429
Genomic and cartography
GoldenPath (UCSC)CALML4  -  15q23   chr15:68483043-68498448 -  15q23   [Description]    (hg19-Feb_2009)
EnsemblCALML4 - 15q23 [CytoView]
Mapping of homologs : NCBICALML4 [Mapview]
Gene and transcription
Genbank (Entrez)AF308287 AK092628 AK296804 BC009516 BC015215
RefSeq transcript (Entrez)NM_001031733 NM_001286694 NM_001286695 NM_033429
RefSeq genomic (Entrez)AC_000147 NC_000015 NC_018926 NT_010194 NW_001838218 NW_004929398
Consensus coding sequences : CCDS (NCBI)CALML4
Cluster EST : UnigeneHs.709550 [ NCBI ]
CGAP (NCI)Hs.709550
Alternative Splicing : Fast-db (Paris)GSHG0010540
Gene ExpressionCALML4 [ NCBI-GEO ]     CALML4 [ SEEK ]   CALML4 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96GE6 (Uniprot)
NextProtQ96GE6  [Medical]
With graphics : InterProQ96GE6
Splice isoforms : SwissVarQ96GE6 (Swissvar)
Domaine pattern : Prosite (Expaxy)EF_HAND_2 (PS50222)   
Domains : Interpro (EBI)EF-hand-dom_pair [organisation]   EF_hand_dom [organisation]  
Related proteins : CluSTrQ96GE6
Domain families : Pfam (Sanger)EF-hand_7 (PF13499)   
Domain families : Pfam (NCBI)pfam13499   
Domain families : Smart (EMBL)EFh (SM00054)  
DMDM Disease mutations91860
Blocks (Seattle)Q96GE6
Peptide AtlasQ96GE6
HPRD12998
IPIIPI00478437   IPI00791138   IPI00789951   IPI00852704   IPI00853344   
Protein Interaction databases
DIP (DOE-UCLA)Q96GE6
IntAct (EBI)Q96GE6
BioGRIDCALML4
InParanoidQ96GE6
Interologous Interaction database Q96GE6
IntegromeDBCALML4
STRING (EMBL)CALML4
Ontologies - Pathways
Ontology : AmiGOcalcium ion binding  
Ontology : EGO-EBIcalcium ion binding  
Protein Interaction DatabaseCALML4
Wikipedia pathwaysCALML4
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CALML4
snp3D : Map Gene to Disease91860
SNP (GeneSNP Utah)CALML4
SNP : HGBaseCALML4
Genetic variants : HAPMAPCALML4
Exome VariantCALML4
1000_GenomesCALML4 
Somatic Mutations in Cancer : COSMICCALML4 
CONAN: Copy Number AnalysisCALML4 
Mutations and Diseases : HGMDCALML4
Genomic VariantsCALML4  CALML4 [DGVbeta]
dbVarCALML4
ClinVarCALML4
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM
MedgenCALML4
GENETestsCALML4
Disease Genetic AssociationCALML4
Huge Navigator CALML4 [HugePedia]  CALML4 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneCALML4
Homology/Alignments : Family Browser (UCSC)CALML4
Phylogenetic Trees/Animal Genes : TreeFamCALML4
Chemical/Protein Interactions : CTD91860
Chemical/Pharm GKB GenePA134903345
Clinical trialCALML4
Other databases
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
CoreMineCALML4
iHOPCALML4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jul 11 16:47:38 CEST 2014

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