Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CAMKMT (calmodulin-lysine N-methyltransferase)

Identity

Alias_namesC2orf34
chromosome 2 open reading frame 34
Alias_symbol (synonym)CLNMT
Other aliasCaM KMT
Cam
KMT
HGNC (Hugo) CAMKMT
LocusID (NCBI) 79823
Atlas_Id 61396
Location 2p21  [Link to chromosome band 2p21]
Location_base_pair Starts at 44589043 and ends at 44999731 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PRKCE (2p21) / CAMKMT (2p21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CAMKMT   26276
Cards
Entrez_Gene (NCBI)CAMKMT  79823  calmodulin-lysine N-methyltransferase
AliasesC2orf34; CLNMT; CaM; Cam; 
KMT
GeneCards (Weizmann)CAMKMT
Ensembl hg19 (Hinxton)ENSG00000143919 [Gene_View]  chr2:44589043-44999731 [Contig_View]  CAMKMT [Vega]
Ensembl hg38 (Hinxton)ENSG00000143919 [Gene_View]  chr2:44589043-44999731 [Contig_View]  CAMKMT [Vega]
ICGC DataPortalENSG00000143919
TCGA cBioPortalCAMKMT
AceView (NCBI)CAMKMT
Genatlas (Paris)CAMKMT
WikiGenes79823
SOURCE (Princeton)CAMKMT
Genetics Home Reference (NIH)CAMKMT
Genomic and cartography
GoldenPath hg19 (UCSC)CAMKMT  -     chr2:44589043-44999731 +  2p21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CAMKMT  -     2p21   [Description]    (hg38-Dec_2013)
EnsemblCAMKMT - 2p21 [CytoView hg19]  CAMKMT - 2p21 [CytoView hg38]
Mapping of homologs : NCBICAMKMT [Mapview hg19]  CAMKMT [Mapview hg38]
OMIM609559   
Gene and transcription
Genbank (Entrez)AI933944 AK027104 BC022192 BC029359 BC053733
RefSeq transcript (Entrez)NM_024766
RefSeq genomic (Entrez)NC_000002 NC_018913 NG_032944 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)CAMKMT
Cluster EST : UnigeneHs.468349 [ NCBI ]
CGAP (NCI)Hs.468349
Alternative Splicing GalleryENSG00000143919
Gene ExpressionCAMKMT [ NCBI-GEO ]   CAMKMT [ EBI - ARRAY_EXPRESS ]   CAMKMT [ SEEK ]   CAMKMT [ MEM ]
Gene Expression Viewer (FireBrowse)CAMKMT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79823
GTEX Portal (Tissue expression)CAMKMT
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z624   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z624  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z624
Splice isoforms : SwissVarQ7Z624
PhosPhoSitePlusQ7Z624
Domaine pattern : Prosite (Expaxy)SAM_CLNMT (PS51610)   
Domains : Interpro (EBI)CaM-Lys-N-MeTrfase    Nicotinamide_N-MeTfrase-like    SAM-dependent_MTases   
Domain families : Pfam (Sanger)Methyltransf_16 (PF10294)   
Domain families : Pfam (NCBI)pfam10294   
Conserved Domain (NCBI)CAMKMT
DMDM Disease mutations79823
Blocks (Seattle)CAMKMT
PDB (SRS)4PWY   
PDB (PDBSum)4PWY   
PDB (IMB)4PWY   
PDB (RSDB)4PWY   
Structural Biology KnowledgeBase4PWY   
SCOP (Structural Classification of Proteins)4PWY   
CATH (Classification of proteins structures)4PWY   
SuperfamilyQ7Z624
Human Protein AtlasENSG00000143919
Peptide AtlasQ7Z624
HPRD08028
IPIIPI00470629   IPI00855870   IPI00939303   IPI00892922   IPI00893022   IPI00893196   IPI00893409   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z624
IntAct (EBI)Q7Z624
FunCoupENSG00000143919
BioGRIDCAMKMT
STRING (EMBL)CAMKMT
ZODIACCAMKMT
Ontologies - Pathways
QuickGOQ7Z624
Ontology : AmiGOnucleus  Golgi apparatus  peptidyl-lysine methylation  calmodulin-lysine N-methyltransferase activity  
Ontology : EGO-EBInucleus  Golgi apparatus  peptidyl-lysine methylation  calmodulin-lysine N-methyltransferase activity  
NDEx NetworkCAMKMT
Atlas of Cancer Signalling NetworkCAMKMT
Wikipedia pathwaysCAMKMT
Orthology - Evolution
OrthoDB79823
GeneTree (enSembl)ENSG00000143919
Phylogenetic Trees/Animal Genes : TreeFamCAMKMT
HOVERGENQ7Z624
HOGENOMQ7Z624
Homologs : HomoloGeneCAMKMT
Homology/Alignments : Family Browser (UCSC)CAMKMT
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCAMKMT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CAMKMT
dbVarCAMKMT
ClinVarCAMKMT
1000_GenomesCAMKMT 
Exome Variant ServerCAMKMT
ExAC (Exome Aggregation Consortium)CAMKMT (select the gene name)
Genetic variants : HAPMAP79823
Genomic Variants (DGV)CAMKMT [DGVbeta]
DECIPHER (Syndromes)2:44589043-44999731  ENSG00000143919
CONAN: Copy Number AnalysisCAMKMT 
Mutations
ICGC Data PortalCAMKMT 
TCGA Data PortalCAMKMT 
Broad Tumor PortalCAMKMT
OASIS PortalCAMKMT [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCAMKMT  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCAMKMT
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CAMKMT
DgiDB (Drug Gene Interaction Database)CAMKMT
DoCM (Curated mutations)CAMKMT (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CAMKMT (select a term)
intoGenCAMKMT
Cancer3DCAMKMT(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609559   
Orphanet17525    19272    22441   
MedgenCAMKMT
Genetic Testing Registry CAMKMT
NextProtQ7Z624 [Medical]
TSGene79823
GENETestsCAMKMT
Huge Navigator CAMKMT [HugePedia]
snp3D : Map Gene to Disease79823
BioCentury BCIQCAMKMT
ClinGenCAMKMT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79823
Chemical/Pharm GKB GenePA142672380
Clinical trialCAMKMT
Miscellaneous
canSAR (ICR)CAMKMT (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCAMKMT
EVEXCAMKMT
GoPubMedCAMKMT
iHOPCAMKMT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:58:02 CET 2017

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