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CAMLG (calcium modulating ligand)

Identity

Alias_symbol (synonym)CAML
GET2
Other alias
HGNC (Hugo) CAMLG
LocusID (NCBI) 819
Atlas_Id 46076
Location 5q31.1  [Link to chromosome band 5q31]
Location_base_pair Starts at 134074170 and ends at 134087850 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CAMLG (5q31.1) / C5orf42 (5p13.2)CAMLG (5q31.1) / CAMLG (5q31.1)CDCP1 (3p21.31) / CAMLG (5q31.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CAMLG   1471
Cards
Entrez_Gene (NCBI)CAMLG  819  calcium modulating ligand
AliasesCAML; GET2
GeneCards (Weizmann)CAMLG
Ensembl hg19 (Hinxton)ENSG00000164615 [Gene_View]  chr5:134074170-134087850 [Contig_View]  CAMLG [Vega]
Ensembl hg38 (Hinxton)ENSG00000164615 [Gene_View]  chr5:134074170-134087850 [Contig_View]  CAMLG [Vega]
ICGC DataPortalENSG00000164615
TCGA cBioPortalCAMLG
AceView (NCBI)CAMLG
Genatlas (Paris)CAMLG
WikiGenes819
SOURCE (Princeton)CAMLG
Genetics Home Reference (NIH)CAMLG
Genomic and cartography
GoldenPath hg19 (UCSC)CAMLG  -     chr5:134074170-134087850 +  5q31.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CAMLG  -     5q31.1   [Description]    (hg38-Dec_2013)
EnsemblCAMLG - 5q31.1 [CytoView hg19]  CAMLG - 5q31.1 [CytoView hg38]
Mapping of homologs : NCBICAMLG [Mapview hg19]  CAMLG [Mapview hg38]
OMIM601118   
Gene and transcription
Genbank (Entrez)AF068179 AK313156 BC063532 BC130325 BG720084
RefSeq transcript (Entrez)NM_001745
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929323
Consensus coding sequences : CCDS (NCBI)CAMLG
Cluster EST : UnigeneHs.529846 [ NCBI ]
CGAP (NCI)Hs.529846
Alternative Splicing GalleryENSG00000164615
Gene ExpressionCAMLG [ NCBI-GEO ]   CAMLG [ EBI - ARRAY_EXPRESS ]   CAMLG [ SEEK ]   CAMLG [ MEM ]
Gene Expression Viewer (FireBrowse)CAMLG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)819
GTEX Portal (Tissue expression)CAMLG
Protein : pattern, domain, 3D structure
UniProt/SwissProtP49069   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP49069  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP49069
Splice isoforms : SwissVarP49069
PhosPhoSitePlusP49069
Domains : Interpro (EBI)Ca_signal-mod_cyclophilin_lig   
Domain families : Pfam (Sanger)CAML (PF14963)   
Domain families : Pfam (NCBI)pfam14963   
Conserved Domain (NCBI)CAMLG
DMDM Disease mutations819
Blocks (Seattle)CAMLG
SuperfamilyP49069
Human Protein AtlasENSG00000164615
Peptide AtlasP49069
HPRD03073
IPIIPI00025729   IPI00967054   
Protein Interaction databases
DIP (DOE-UCLA)P49069
IntAct (EBI)P49069
FunCoupENSG00000164615
BioGRIDCAMLG
STRING (EMBL)CAMLG
ZODIACCAMLG
Ontologies - Pathways
QuickGOP49069
Ontology : AmiGOreceptor recycling  protein binding  endoplasmic reticulum  defense response  signal transduction  epidermal growth factor receptor signaling pathway  membrane  integral component of membrane  viral process  cell adhesion molecule binding  
Ontology : EGO-EBIreceptor recycling  protein binding  endoplasmic reticulum  defense response  signal transduction  epidermal growth factor receptor signaling pathway  membrane  integral component of membrane  viral process  cell adhesion molecule binding  
NDEx NetworkCAMLG
Atlas of Cancer Signalling NetworkCAMLG
Wikipedia pathwaysCAMLG
Orthology - Evolution
OrthoDB819
GeneTree (enSembl)ENSG00000164615
Phylogenetic Trees/Animal Genes : TreeFamCAMLG
HOVERGENP49069
HOGENOMP49069
Homologs : HomoloGeneCAMLG
Homology/Alignments : Family Browser (UCSC)CAMLG
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCAMLG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CAMLG
dbVarCAMLG
ClinVarCAMLG
1000_GenomesCAMLG 
Exome Variant ServerCAMLG
ExAC (Exome Aggregation Consortium)CAMLG (select the gene name)
Genetic variants : HAPMAP819
Genomic Variants (DGV)CAMLG [DGVbeta]
DECIPHER (Syndromes)5:134074170-134087850  ENSG00000164615
CONAN: Copy Number AnalysisCAMLG 
Mutations
ICGC Data PortalCAMLG 
TCGA Data PortalCAMLG 
Broad Tumor PortalCAMLG
OASIS PortalCAMLG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCAMLG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCAMLG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CAMLG
DgiDB (Drug Gene Interaction Database)CAMLG
DoCM (Curated mutations)CAMLG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CAMLG (select a term)
intoGenCAMLG
Cancer3DCAMLG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601118   
Orphanet
MedgenCAMLG
Genetic Testing Registry CAMLG
NextProtP49069 [Medical]
TSGene819
GENETestsCAMLG
Huge Navigator CAMLG [HugePedia]
snp3D : Map Gene to Disease819
BioCentury BCIQCAMLG
ClinGenCAMLG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD819
Chemical/Pharm GKB GenePA26053
Clinical trialCAMLG
Miscellaneous
canSAR (ICR)CAMLG (select the gene name)
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCAMLG
EVEXCAMLG
GoPubMedCAMLG
iHOPCAMLG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:58:37 CET 2017

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