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CAND2 (cullin-associated and neddylation-dissociated 2 (putative))

Identity

Alias_namescullin-associated and neddylation-dissociated 2 (putative)
Alias_symbol (synonym)TIP120B
KIAA0667
Tp120b
Other alias
HGNC (Hugo) CAND2
LocusID (NCBI) 23066
Atlas_Id 61403
Location 3p25.2  [Link to chromosome band 3p25]
Location_base_pair Starts at 12838171 and ends at 12876313 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
COL6A2 (21q22.3) / CAND2 (3p25.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CAND2   30689
Cards
Entrez_Gene (NCBI)CAND2  23066  cullin-associated and neddylation-dissociated 2 (putative)
AliasesTIP120B; Tp120b
GeneCards (Weizmann)CAND2
Ensembl hg19 (Hinxton)ENSG00000144712 [Gene_View]  chr3:12838171-12876313 [Contig_View]  CAND2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000144712 [Gene_View]  chr3:12838171-12876313 [Contig_View]  CAND2 [Vega]
ICGC DataPortalENSG00000144712
TCGA cBioPortalCAND2
AceView (NCBI)CAND2
Genatlas (Paris)CAND2
WikiGenes23066
SOURCE (Princeton)CAND2
Genetics Home Reference (NIH)CAND2
Genomic and cartography
GoldenPath hg19 (UCSC)CAND2  -     chr3:12838171-12876313 +  3p25.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CAND2  -     3p25.2   [Description]    (hg38-Dec_2013)
EnsemblCAND2 - 3p25.2 [CytoView hg19]  CAND2 - 3p25.2 [CytoView hg38]
Mapping of homologs : NCBICAND2 [Mapview hg19]  CAND2 [Mapview hg38]
OMIM610403   
Gene and transcription
Genbank (Entrez)AB014567 BC136592 BE256308 BX502783 BX648800
RefSeq transcript (Entrez)NM_001162499 NM_012298
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_022517 NW_004929309
Consensus coding sequences : CCDS (NCBI)CAND2
Cluster EST : UnigeneHs.343664 [ NCBI ]
CGAP (NCI)Hs.343664
Alternative Splicing GalleryENSG00000144712
Gene ExpressionCAND2 [ NCBI-GEO ]   CAND2 [ EBI - ARRAY_EXPRESS ]   CAND2 [ SEEK ]   CAND2 [ MEM ]
Gene Expression Viewer (FireBrowse)CAND2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23066
GTEX Portal (Tissue expression)CAND2
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75155   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75155  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75155
Splice isoforms : SwissVarO75155
PhosPhoSitePlusO75155
Domains : Interpro (EBI)ARM-like    ARM-type_fold    TATA-bd_TIP120   
Domain families : Pfam (Sanger)TIP120 (PF08623)   
Domain families : Pfam (NCBI)pfam08623   
Conserved Domain (NCBI)CAND2
DMDM Disease mutations23066
Blocks (Seattle)CAND2
SuperfamilyO75155
Human Protein AtlasENSG00000144712
Peptide AtlasO75155
IPIIPI00791537   IPI00374208   IPI00925352   IPI00795208   
Protein Interaction databases
DIP (DOE-UCLA)O75155
IntAct (EBI)O75155
FunCoupENSG00000144712
BioGRIDCAND2
STRING (EMBL)CAND2
ZODIACCAND2
Ontologies - Pathways
QuickGOO75155
Ontology : AmiGOprotein binding  intracellular  nucleus  transcription, DNA-templated  SCF complex assembly  protein ubiquitination  TBP-class protein binding  positive regulation of transcription, DNA-templated  
Ontology : EGO-EBIprotein binding  intracellular  nucleus  transcription, DNA-templated  SCF complex assembly  protein ubiquitination  TBP-class protein binding  positive regulation of transcription, DNA-templated  
NDEx NetworkCAND2
Atlas of Cancer Signalling NetworkCAND2
Wikipedia pathwaysCAND2
Orthology - Evolution
OrthoDB23066
GeneTree (enSembl)ENSG00000144712
Phylogenetic Trees/Animal Genes : TreeFamCAND2
HOVERGENO75155
HOGENOMO75155
Homologs : HomoloGeneCAND2
Homology/Alignments : Family Browser (UCSC)CAND2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCAND2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CAND2
dbVarCAND2
ClinVarCAND2
1000_GenomesCAND2 
Exome Variant ServerCAND2
ExAC (Exome Aggregation Consortium)CAND2 (select the gene name)
Genetic variants : HAPMAP23066
Genomic Variants (DGV)CAND2 [DGVbeta]
DECIPHER (Syndromes)3:12838171-12876313  ENSG00000144712
CONAN: Copy Number AnalysisCAND2 
Mutations
ICGC Data PortalCAND2 
TCGA Data PortalCAND2 
Broad Tumor PortalCAND2
OASIS PortalCAND2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCAND2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCAND2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CAND2
DgiDB (Drug Gene Interaction Database)CAND2
DoCM (Curated mutations)CAND2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CAND2 (select a term)
intoGenCAND2
Cancer3DCAND2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610403   
Orphanet
MedgenCAND2
Genetic Testing Registry CAND2
NextProtO75155 [Medical]
TSGene23066
GENETestsCAND2
Huge Navigator CAND2 [HugePedia]
snp3D : Map Gene to Disease23066
BioCentury BCIQCAND2
ClinGenCAND2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23066
Chemical/Pharm GKB GenePA142672208
Clinical trialCAND2
Miscellaneous
canSAR (ICR)CAND2 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCAND2
EVEXCAND2
GoPubMedCAND2
iHOPCAND2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:58:03 CET 2017

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