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CAPN10-AS1 (CAPN10 antisense RNA 1 (head to head))

Identity

Alias_symbol (synonym)locus959
Other alias
HGNC (Hugo) CAPN10-AS1
LocusID (NCBI) 101752400
Atlas_Id 61404
Location 2q37.3  [Link to chromosome band 2q37]
Location_base_pair Starts at 240582750 and ends at 240586316 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CAPN10-AS1   48839
Cards
Entrez_Gene (NCBI)CAPN10-AS1  101752400  CAPN10 antisense RNA 1 (head to head)
Aliaseslocus959
GeneCards (Weizmann)CAPN10-AS1
Ensembl hg19 (Hinxton)ENSG00000260942 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260942 [Gene_View]  chr2:240582750-240586316 [Contig_View]  CAPN10-AS1 [Vega]
ICGC DataPortalENSG00000260942
TCGA cBioPortalCAPN10-AS1
AceView (NCBI)CAPN10-AS1
Genatlas (Paris)CAPN10-AS1
WikiGenes101752400
SOURCE (Princeton)CAPN10-AS1
Genetics Home Reference (NIH)CAPN10-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CAPN10-AS1  -     chr2:240582750-240586316 -  2q37.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CAPN10-AS1  -     2q37.3   [Description]    (hg19-Feb_2009)
EnsemblCAPN10-AS1 - 2q37.3 [CytoView hg19]  CAPN10-AS1 - 2q37.3 [CytoView hg38]
Mapping of homologs : NCBICAPN10-AS1 [Mapview hg19]  CAPN10-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024254 AL832402
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CAPN10-AS1
Cluster EST : UnigeneHs.585987 [ NCBI ]
CGAP (NCI)Hs.585987
Alternative Splicing GalleryENSG00000260942
Gene ExpressionCAPN10-AS1 [ NCBI-GEO ]   CAPN10-AS1 [ EBI - ARRAY_EXPRESS ]   CAPN10-AS1 [ SEEK ]   CAPN10-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CAPN10-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101752400
GTEX Portal (Tissue expression)CAPN10-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CAPN10-AS1
DMDM Disease mutations101752400
Blocks (Seattle)CAPN10-AS1
Human Protein AtlasENSG00000260942
Protein Interaction databases
FunCoupENSG00000260942
BioGRIDCAPN10-AS1
STRING (EMBL)CAPN10-AS1
ZODIACCAPN10-AS1
Ontologies - Pathways
Huge Navigator CAPN10-AS1 [HugePedia]
snp3D : Map Gene to Disease101752400
BioCentury BCIQCAPN10-AS1
ClinGenCAPN10-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101752400
Clinical trialCAPN10-AS1
Miscellaneous
canSAR (ICR)CAPN10-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCAPN10-AS1
EVEXCAPN10-AS1
GoPubMedCAPN10-AS1
iHOPCAPN10-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:03:50 CEST 2017

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