Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CARD14 (caspase recruitment domain family, member 14)

Identity

Other namesBIMP2
CARMA2
PRP
PSORS2
PSS1
HGNC (Hugo) CARD14
LocusID (NCBI) 79092
Location 17q25.3
Location_base_pair Starts at 78152307 and ends at 78176430 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CARD14   16446
Cards
Entrez_Gene (NCBI)CARD14  79092  caspase recruitment domain family, member 14
GeneCards (Weizmann)CARD14
Ensembl (Hinxton)ENSG00000141527 [Gene_View]  chr17:78152307-78176430 [Contig_View]  CARD14 [Vega]
AceView (NCBI)CARD14
Genatlas (Paris)CARD14
WikiGenes79092
SOURCE (Princeton)NM_001257970 NM_024110 NM_052819
Genomic and cartography
GoldenPath (UCSC)CARD14  -  17q25.3   chr17:78152307-78176430 +  17q25.3   [Description]    (hg19-Feb_2009)
EnsemblCARD14 - 17q25.3 [CytoView]
Mapping of homologs : NCBICARD14 [Mapview]
OMIM173200   602723   607211   
Gene and transcription
Genbank (Entrez)AF322642 AK002138 AK054723 AK091123 AK095416
RefSeq transcript (Entrez)NM_001257970 NM_024110 NM_052819
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NG_032778 NT_010783 NW_001838457 NW_004929407
Consensus coding sequences : CCDS (NCBI)CARD14
Cluster EST : UnigeneHs.735899 [ NCBI ]
CGAP (NCI)Hs.735899
Alternative Splicing : Fast-db (Paris)GSHG0012882
Alternative Splicing GalleryENSG00000141527
Gene ExpressionCARD14 [ NCBI-GEO ]     CARD14 [ SEEK ]   CARD14 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXL6 (Uniprot)
NextProtQ9BXL6  [Medical]
With graphics : InterProQ9BXL6
Splice isoforms : SwissVarQ9BXL6 (Swissvar)
Domaine pattern : Prosite (Expaxy)CARD (PS50209)    GUANYLATE_KINASE_1 (PS00856)    GUANYLATE_KINASE_2 (PS50052)    PDZ (PS50106)   
Domains : Interpro (EBI)CARD    DEATH-like_dom    GK/Ca_channel_bsu    Guanylate_kin-like    P-loop_NTPase    PDZ   
Related proteins : CluSTrQ9BXL6
Domain families : Pfam (Sanger)CARD (PF00619)   
Domain families : Pfam (NCBI)pfam00619   
Domain families : Smart (EMBL)GuKc (SM00072)  PDZ (SM00228)  
DMDM Disease mutations79092
Blocks (Seattle)Q9BXL6
Human Protein AtlasENSG00000141527
Peptide AtlasQ9BXL6
HPRD06235
IPIIPI00012213   IPI00910534   IPI00031392   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXL6
IntAct (EBI)Q9BXL6
FunCoupENSG00000141527
BioGRIDCARD14
InParanoidQ9BXL6
Interologous Interaction database Q9BXL6
IntegromeDBCARD14
STRING (EMBL)CARD14
Ontologies - Pathways
Ontology : AmiGOpositive regulation of protein phosphorylation  cytoplasm  plasma membrane  apoptotic process  activation of NF-kappaB-inducing kinase activity  aggresome  tumor necrosis factor-mediated signaling pathway  negative regulation of apoptotic process  CARD domain binding  positive regulation of NF-kappaB transcription factor activity  
Ontology : EGO-EBIpositive regulation of protein phosphorylation  cytoplasm  plasma membrane  apoptotic process  activation of NF-kappaB-inducing kinase activity  aggresome  tumor necrosis factor-mediated signaling pathway  negative regulation of apoptotic process  CARD domain binding  positive regulation of NF-kappaB transcription factor activity  
REACTOMECARD14
Protein Interaction DatabaseCARD14
Wikipedia pathwaysCARD14
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CARD14
SNP (GeneSNP Utah)CARD14
SNP : HGBaseCARD14
Genetic variants : HAPMAPCARD14
1000_GenomesCARD14 
ICGC programENSG00000141527 
Somatic Mutations in Cancer : COSMICCARD14 
CONAN: Copy Number AnalysisCARD14 
Mutations and Diseases : HGMDCARD14
OMIM173200    602723    607211   
GENETestsCARD14
Disease Genetic AssociationCARD14
Huge Navigator CARD14 [HugePedia]  CARD14 [HugeCancerGEM]
Genomic VariantsCARD14  CARD14 [DGVbeta]
Exome VariantCARD14
dbVarCARD14
ClinVarCARD14
snp3D : Map Gene to Disease79092
General knowledge
Homologs : HomoloGeneCARD14
Homology/Alignments : Family Browser (UCSC)CARD14
Phylogenetic Trees/Animal Genes : TreeFamCARD14
Chemical/Protein Interactions : CTD79092
Chemical/Pharm GKB GenePA134959119
Clinical trialCARD14
Cancer Resource (Charite)ENSG00000141527
Other databases
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
CoreMineCARD14
iHOPCARD14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Apr 18 16:56:56 CEST 2014

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.