Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CARD19 (caspase recruitment domain family member 19)

Identity

Alias_namesC9orf89
chromosome 9 open reading frame 89
caspase recruitment domain family, member 19
Alias_symbol (synonym)MGC11115
bA370F5.1
BinCARD
Other alias
HGNC (Hugo) CARD19
LocusID (NCBI) 84270
Atlas_Id 77812
Location 9q22.31  [Link to chromosome band 9q22]
Location_base_pair Starts at 95858450 and ends at 95875565 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
TGOLN2 (2p11.2) / CARD19 (9q22.31)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CARD19   28148
Cards
Entrez_Gene (NCBI)CARD19  84270  caspase recruitment domain family member 19
AliasesBinCARD; C9orf89
GeneCards (Weizmann)CARD19
Ensembl hg19 (Hinxton)ENSG00000165233 [Gene_View]  chr9:95858450-95875565 [Contig_View]  CARD19 [Vega]
Ensembl hg38 (Hinxton)ENSG00000165233 [Gene_View]  chr9:95858450-95875565 [Contig_View]  CARD19 [Vega]
ICGC DataPortalENSG00000165233
TCGA cBioPortalCARD19
AceView (NCBI)CARD19
Genatlas (Paris)CARD19
WikiGenes84270
SOURCE (Princeton)CARD19
Genetics Home Reference (NIH)CARD19
Genomic and cartography
GoldenPath hg19 (UCSC)CARD19  -     chr9:95858450-95875565 +  9q22.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CARD19  -     9q22.31   [Description]    (hg38-Dec_2013)
EnsemblCARD19 - 9q22.31 [CytoView hg19]  CARD19 - 9q22.31 [CytoView hg38]
Mapping of homologs : NCBICARD19 [Mapview hg19]  CARD19 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001318010 NM_001318011 NM_032310
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)CARD19
Cluster EST : UnigeneHs.434213 [ NCBI ]
CGAP (NCI)Hs.434213
Alternative Splicing GalleryENSG00000165233
Gene ExpressionCARD19 [ NCBI-GEO ]   CARD19 [ EBI - ARRAY_EXPRESS ]   CARD19 [ SEEK ]   CARD19 [ MEM ]
Gene Expression Viewer (FireBrowse)CARD19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)84270
GTEX Portal (Tissue expression)CARD19
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CARD19
DMDM Disease mutations84270
Blocks (Seattle)CARD19
Human Protein AtlasENSG00000165233
HPRD12985
IPIIPI00336153   IPI00177808   
Protein Interaction databases
FunCoupENSG00000165233
BioGRIDCARD19
STRING (EMBL)CARD19
ZODIACCARD19
Ontologies - Pathways
Huge Navigator CARD19 [HugePedia]
snp3D : Map Gene to Disease84270
BioCentury BCIQCARD19
ClinGenCARD19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84270
Chemical/Pharm GKB GenePA134909664
Clinical trialCARD19
Miscellaneous
canSAR (ICR)CARD19 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCARD19
EVEXCARD19
GoPubMedCARD19
iHOPCARD19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:58:06 CET 2017

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