Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CARMIL2 (capping protein regulator and myosin 1 linker 2)

Identity

Alias_namesRLTPR
RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing
Alias_symbol (synonym)LRRC16C
Other aliasCARMIL2b
HGNC (Hugo) CARMIL2
LocusID (NCBI) 146206
Atlas_Id 78439
Location 16q22.1  [Link to chromosome band 16q22]
Location_base_pair Starts at 67679030 and ends at 67691472 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CARMIL2   27089
Cards
Entrez_Gene (NCBI)CARMIL2  146206  capping protein regulator and myosin 1 linker 2
AliasesCARMIL2b; LRRC16C; RLTPR
GeneCards (Weizmann)CARMIL2
Ensembl hg19 (Hinxton)ENSG00000159753 [Gene_View]  chr16:67679030-67691472 [Contig_View]  CARMIL2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000159753 [Gene_View]  chr16:67679030-67691472 [Contig_View]  CARMIL2 [Vega]
ICGC DataPortalENSG00000159753
TCGA cBioPortalCARMIL2
AceView (NCBI)CARMIL2
Genatlas (Paris)CARMIL2
WikiGenes146206
SOURCE (Princeton)CARMIL2
Genetics Home Reference (NIH)CARMIL2
Genomic and cartography
GoldenPath hg19 (UCSC)CARMIL2  -     chr16:67679030-67691472 +  16q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CARMIL2  -     16q22.1   [Description]    (hg38-Dec_2013)
EnsemblCARMIL2 - 16q22.1 [CytoView hg19]  CARMIL2 - 16q22.1 [CytoView hg38]
Mapping of homologs : NCBICARMIL2 [Mapview hg19]  CARMIL2 [Mapview hg38]
OMIM610859   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001013838 NM_001317026
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CARMIL2
Cluster EST : UnigeneHs.611432 [ NCBI ]
CGAP (NCI)Hs.611432
Alternative Splicing GalleryENSG00000159753
Gene ExpressionCARMIL2 [ NCBI-GEO ]   CARMIL2 [ EBI - ARRAY_EXPRESS ]   CARMIL2 [ SEEK ]   CARMIL2 [ MEM ]
Gene Expression Viewer (FireBrowse)CARMIL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)146206
GTEX Portal (Tissue expression)CARMIL2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CARMIL2
DMDM Disease mutations146206
Blocks (Seattle)CARMIL2
Human Protein AtlasENSG00000159753
HPRD18556
IPIIPI00456628   IPI01015638   IPI00743882   IPI00168768   
Protein Interaction databases
FunCoupENSG00000159753
BioGRIDCARMIL2
STRING (EMBL)CARMIL2
ZODIACCARMIL2
Ontologies - Pathways
Huge Navigator CARMIL2 [HugePedia]
snp3D : Map Gene to Disease146206
BioCentury BCIQCARMIL2
ClinGenCARMIL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD146206
Chemical/Pharm GKB GenePA162401371
Clinical trialCARMIL2
Miscellaneous
canSAR (ICR)CARMIL2 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCARMIL2
EVEXCARMIL2
GoPubMedCARMIL2
iHOPCARMIL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:58:08 CET 2017

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