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CASC6 (cancer susceptibility 6)

Identity

Other alias-
HGNC (Hugo) CASC6
LocusID (NCBI) 101929083
Atlas_Id 53521
Location 6q15  [Link to chromosome band 6q15]
Location_base_pair Starts at 91629040 and ends at 91690428 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CASC6   49076
Cards
Entrez_Gene (NCBI)CASC6  101929083  cancer susceptibility 6
Aliases
GeneCards (Weizmann)CASC6
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:91629040-91690428 [Contig_View]  CASC6 [Vega]
TCGA cBioPortalCASC6
AceView (NCBI)CASC6
Genatlas (Paris)CASC6
WikiGenes101929083
SOURCE (Princeton)CASC6
Genetics Home Reference (NIH)CASC6
Genomic and cartography
GoldenPath hg38 (UCSC)CASC6  -     chr6:91629040-91690428 -  6q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CASC6  -     6q15   [Description]    (hg19-Feb_2009)
EnsemblCASC6 - 6q15 [CytoView hg19]  CASC6 - 6q15 [CytoView hg38]
Mapping of homologs : NCBICASC6 [Mapview hg19]  CASC6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC037927
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CASC6
Cluster EST : UnigeneHs.586238 [ NCBI ]
CGAP (NCI)Hs.586238
Gene ExpressionCASC6 [ NCBI-GEO ]   CASC6 [ EBI - ARRAY_EXPRESS ]   CASC6 [ SEEK ]   CASC6 [ MEM ]
Gene Expression Viewer (FireBrowse)CASC6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929083
GTEX Portal (Tissue expression)CASC6
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CASC6
DMDM Disease mutations101929083
Blocks (Seattle)CASC6
Protein Interaction databases
BioGRIDCASC6
STRING (EMBL)CASC6
ZODIACCASC6
Ontologies - Pathways
Huge Navigator CASC6 [HugePedia]
snp3D : Map Gene to Disease101929083
BioCentury BCIQCASC6
ClinGenCASC6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929083
Clinical trialCASC6
Miscellaneous
canSAR (ICR)CASC6 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCASC6
EVEXCASC6
GoPubMedCASC6
iHOPCASC6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 10:55:47 CET 2018

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