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CASP1P2 (caspase 1 pseudogene 2)

Identity

Alias (NCBI)-
HGNC (Hugo) CASP1P2
HGNC Previous namecaspase 1, apoptosis-related cysteine peptidase pseudogene 2
LocusID (NCBI) 440067
Atlas_Id 77485
Location 11q22.3  [Link to chromosome band 11q22]
Location_base_pair Starts at 105062602 and ends at 105071530 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CASP1P2   43776
Cards
Entrez_Gene (NCBI)CASP1P2    caspase 1 pseudogene 2
Aliases
GeneCards (Weizmann)CASP1P2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr11:105062602-105071530 [Contig_View]  CASP1P2 [Vega]
TCGA cBioPortalCASP1P2
AceView (NCBI)CASP1P2
Genatlas (Paris)CASP1P2
SOURCE (Princeton)CASP1P2
Genetics Home Reference (NIH)CASP1P2
Genomic and cartography
GoldenPath hg38 (UCSC)CASP1P2  -     chr11:105062602-105071530 -  11q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CASP1P2  -     11q22.3   [Description]    (hg19-Feb_2009)
GoldenPathCASP1P2 - 11q22.3 [CytoView hg19]  CASP1P2 - 11q22.3 [CytoView hg38]
genome Data Viewer NCBICASP1P2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB231723 BU753985 CB985891 CF529034
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CASP1P2
Gene ExpressionCASP1P2 [ NCBI-GEO ]   CASP1P2 [ EBI - ARRAY_EXPRESS ]   CASP1P2 [ SEEK ]   CASP1P2 [ MEM ]
Gene Expression Viewer (FireBrowse)CASP1P2 [ Firebrowse - Broad ]
GenevisibleExpression of CASP1P2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)440067
GTEX Portal (Tissue expression)CASP1P2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CASP1P2
Blocks (Seattle)CASP1P2
Protein Interaction databases
BioGRIDCASP1P2
STRING (EMBL)CASP1P2
ZODIACCASP1P2
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCASP1P2
EVEXCASP1P2
GoPubMedCASP1P2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 16:48:45 CET 2020
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