Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CATIP-AS1 (CATIP antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) CATIP-AS1
LocusID (NCBI) 101928513
Atlas_Id 61431
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 218366665 and ends at 218367902 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CATIP-AS1   41080
Cards
Entrez_Gene (NCBI)CATIP-AS1  101928513  CATIP antisense RNA 1
Aliases
GeneCards (Weizmann)CATIP-AS1
Ensembl hg19 (Hinxton)ENSG00000225062 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225062 [Gene_View]  chr2:218366665-218367902 [Contig_View]  CATIP-AS1 [Vega]
ICGC DataPortalENSG00000225062
TCGA cBioPortalCATIP-AS1
AceView (NCBI)CATIP-AS1
Genatlas (Paris)CATIP-AS1
WikiGenes101928513
SOURCE (Princeton)CATIP-AS1
Genetics Home Reference (NIH)CATIP-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CATIP-AS1  -     chr2:218366665-218367902 -  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CATIP-AS1  -     2q35   [Description]    (hg19-Feb_2009)
EnsemblCATIP-AS1 - 2q35 [CytoView hg19]  CATIP-AS1 - 2q35 [CytoView hg38]
Mapping of homologs : NCBICATIP-AS1 [Mapview hg19]  CATIP-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038211 CB528646 HY001981
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CATIP-AS1
Cluster EST : UnigeneHs.512386 [ NCBI ]
CGAP (NCI)Hs.512386
Alternative Splicing GalleryENSG00000225062
Gene ExpressionCATIP-AS1 [ NCBI-GEO ]   CATIP-AS1 [ EBI - ARRAY_EXPRESS ]   CATIP-AS1 [ SEEK ]   CATIP-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CATIP-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928513
GTEX Portal (Tissue expression)CATIP-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CATIP-AS1
DMDM Disease mutations101928513
Blocks (Seattle)CATIP-AS1
Human Protein AtlasENSG00000225062
Protein Interaction databases
FunCoupENSG00000225062
BioGRIDCATIP-AS1
STRING (EMBL)CATIP-AS1
ZODIACCATIP-AS1
Ontologies - Pathways
Huge Navigator CATIP-AS1 [HugePedia]
snp3D : Map Gene to Disease101928513
BioCentury BCIQCATIP-AS1
ClinGenCATIP-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928513
Clinical trialCATIP-AS1
Miscellaneous
canSAR (ICR)CATIP-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineCATIP-AS1
EVEXCATIP-AS1
GoPubMedCATIP-AS1
iHOPCATIP-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:42:11 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.