Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CATSPER2P1 (cation channel sperm associated 2 pseudogene 1)

Identity

Alias_namescation channel, sperm associated 2 pseudogene 1
Other alias-
HGNC (Hugo) CATSPER2P1
LocusID (NCBI) 440278
Atlas_Id 61435
Location 15q15.3  [Link to chromosome band 15q15]
Location_base_pair Starts at 43735948 and ends at 43746298 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CATSPER2P1   31054
Cards
Entrez_Gene (NCBI)CATSPER2P1  440278  cation channel sperm associated 2 pseudogene 1
Aliases
GeneCards (Weizmann)CATSPER2P1
Ensembl hg19 (Hinxton)ENSG00000205771 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205771 [Gene_View]  chr15:43735948-43746298 [Contig_View]  CATSPER2P1 [Vega]
ICGC DataPortalENSG00000205771
TCGA cBioPortalCATSPER2P1
AceView (NCBI)CATSPER2P1
Genatlas (Paris)CATSPER2P1
WikiGenes440278
SOURCE (Princeton)CATSPER2P1
Genetics Home Reference (NIH)CATSPER2P1
Genomic and cartography
GoldenPath hg38 (UCSC)CATSPER2P1  -     chr15:43735948-43746298 -  15q15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CATSPER2P1  -     15q15.3   [Description]    (hg19-Feb_2009)
EnsemblCATSPER2P1 - 15q15.3 [CytoView hg19]  CATSPER2P1 - 15q15.3 [CytoView hg38]
Mapping of homologs : NCBICATSPER2P1 [Mapview hg19]  CATSPER2P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC047442 BC052612 BC066967
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CATSPER2P1
Cluster EST : UnigeneHs.253260 [ NCBI ]
CGAP (NCI)Hs.253260
Alternative Splicing GalleryENSG00000205771
Gene ExpressionCATSPER2P1 [ NCBI-GEO ]   CATSPER2P1 [ EBI - ARRAY_EXPRESS ]   CATSPER2P1 [ SEEK ]   CATSPER2P1 [ MEM ]
Gene Expression Viewer (FireBrowse)CATSPER2P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440278
GTEX Portal (Tissue expression)CATSPER2P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CATSPER2P1
DMDM Disease mutations440278
Blocks (Seattle)CATSPER2P1
Human Protein AtlasENSG00000205771
Protein Interaction databases
FunCoupENSG00000205771
BioGRIDCATSPER2P1
STRING (EMBL)CATSPER2P1
ZODIACCATSPER2P1
Ontologies - Pathways
Huge Navigator CATSPER2P1 [HugePedia]
snp3D : Map Gene to Disease440278
BioCentury BCIQCATSPER2P1
ClinGenCATSPER2P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440278
Chemical/Pharm GKB GenePA143485409
Clinical trialCATSPER2P1
Miscellaneous
canSAR (ICR)CATSPER2P1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCATSPER2P1
EVEXCATSPER2P1
GoPubMedCATSPER2P1
iHOPCATSPER2P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:42:11 CEST 2017

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