Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CBR3-AS1 (CBR3 antisense RNA 1)

Identity

Alias_namesCBR3 antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)PlncRNA-1
Other aliasPlncRNA1
HGNC (Hugo) CBR3-AS1
LocusID (NCBI) 100506428
Atlas_Id 53869
Location 21q22.12  [Link to chromosome band 21q22]
Location_base_pair Starts at 36131767 and ends at 36156308 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CBR3-AS1   43664
Cards
Entrez_Gene (NCBI)CBR3-AS1  100506428  CBR3 antisense RNA 1
AliasesPlncRNA-1; PlncRNA1
GeneCards (Weizmann)CBR3-AS1
Ensembl hg19 (Hinxton)ENSG00000236830 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236830 [Gene_View]  chr21:36131767-36156308 [Contig_View]  CBR3-AS1 [Vega]
ICGC DataPortalENSG00000236830
TCGA cBioPortalCBR3-AS1
AceView (NCBI)CBR3-AS1
Genatlas (Paris)CBR3-AS1
WikiGenes100506428
SOURCE (Princeton)CBR3-AS1
Genetics Home Reference (NIH)CBR3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CBR3-AS1  -     chr21:36131767-36156308 -  21q22.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CBR3-AS1  -     21q22.12   [Description]    (hg19-Feb_2009)
EnsemblCBR3-AS1 - 21q22.12 [CytoView hg19]  CBR3-AS1 - 21q22.12 [CytoView hg38]
Mapping of homologs : NCBICBR3-AS1 [Mapview hg19]  CBR3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB004851 AL542398 BC037580 BC038671 BC047014
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CBR3-AS1
Cluster EST : UnigeneHs.651214 [ NCBI ]
CGAP (NCI)Hs.651214
Alternative Splicing GalleryENSG00000236830
Gene ExpressionCBR3-AS1 [ NCBI-GEO ]   CBR3-AS1 [ EBI - ARRAY_EXPRESS ]   CBR3-AS1 [ SEEK ]   CBR3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CBR3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506428
GTEX Portal (Tissue expression)CBR3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CBR3-AS1
DMDM Disease mutations100506428
Blocks (Seattle)CBR3-AS1
Human Protein AtlasENSG00000236830
Protein Interaction databases
FunCoupENSG00000236830
BioGRIDCBR3-AS1
STRING (EMBL)CBR3-AS1
ZODIACCBR3-AS1
Ontologies - Pathways
Huge Navigator CBR3-AS1 [HugePedia]
snp3D : Map Gene to Disease100506428
BioCentury BCIQCBR3-AS1
ClinGenCBR3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506428
Clinical trialCBR3-AS1
Miscellaneous
canSAR (ICR)CBR3-AS1 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCBR3-AS1
EVEXCBR3-AS1
GoPubMedCBR3-AS1
iHOPCBR3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:56:54 CEST 2017

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