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CC2D2B (coiled-coil and C2 domain containing 2B)

Identity

Alias_namesC10orf130
chromosome 10 open reading frame 130
Alias_symbol (synonym)bA248J23.4
Other alias
HGNC (Hugo) CC2D2B
LocusID (NCBI) 387707
Atlas_Id 61457
Location 10q24.1  [Link to chromosome band 10q24]
Location_base_pair Starts at 97759848 and ends at 97792441 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CC2D2B   31666
Cards
Entrez_Gene (NCBI)CC2D2B  387707  coiled-coil and C2 domain containing 2B
AliasesC10orf130; bA248J23.4
GeneCards (Weizmann)CC2D2B
Ensembl hg19 (Hinxton)ENSG00000188649 [Gene_View]  chr10:97759848-97792441 [Contig_View]  CC2D2B [Vega]
Ensembl hg38 (Hinxton)ENSG00000188649 [Gene_View]  chr10:97759848-97792441 [Contig_View]  CC2D2B [Vega]
ICGC DataPortalENSG00000188649
TCGA cBioPortalCC2D2B
AceView (NCBI)CC2D2B
Genatlas (Paris)CC2D2B
WikiGenes387707
SOURCE (Princeton)CC2D2B
Genetics Home Reference (NIH)CC2D2B
Genomic and cartography
GoldenPath hg19 (UCSC)CC2D2B  -     chr10:97759848-97792441 +  10q24.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CC2D2B  -     10q24.1   [Description]    (hg38-Dec_2013)
EnsemblCC2D2B - 10q24.1 [CytoView hg19]  CC2D2B - 10q24.1 [CytoView hg38]
Mapping of homologs : NCBICC2D2B [Mapview hg19]  CC2D2B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022203 AK302377 BC075861 DB026257
RefSeq transcript (Entrez)NM_001001732 NM_001159747
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)CC2D2B
Cluster EST : UnigeneHs.652240 [ NCBI ]
CGAP (NCI)Hs.652240
Alternative Splicing GalleryENSG00000188649
Gene ExpressionCC2D2B [ NCBI-GEO ]   CC2D2B [ EBI - ARRAY_EXPRESS ]   CC2D2B [ SEEK ]   CC2D2B [ MEM ]
Gene Expression Viewer (FireBrowse)CC2D2B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)387707
GTEX Portal (Tissue expression)CC2D2B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6DHV5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6DHV5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6DHV5
Splice isoforms : SwissVarQ6DHV5
PhosPhoSitePlusQ6DHV5
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CC2D2B
DMDM Disease mutations387707
Blocks (Seattle)CC2D2B
SuperfamilyQ6DHV5
Human Protein AtlasENSG00000188649
Peptide AtlasQ6DHV5
HPRD16578
IPIIPI00480155   IPI00419180   IPI00909452   IPI00917737   
Protein Interaction databases
DIP (DOE-UCLA)Q6DHV5
IntAct (EBI)Q6DHV5
FunCoupENSG00000188649
BioGRIDCC2D2B
STRING (EMBL)CC2D2B
ZODIACCC2D2B
Ontologies - Pathways
QuickGOQ6DHV5
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkCC2D2B
Atlas of Cancer Signalling NetworkCC2D2B
Wikipedia pathwaysCC2D2B
Orthology - Evolution
OrthoDB387707
GeneTree (enSembl)ENSG00000188649
Phylogenetic Trees/Animal Genes : TreeFamCC2D2B
HOVERGENQ6DHV5
HOGENOMQ6DHV5
Homologs : HomoloGeneCC2D2B
Homology/Alignments : Family Browser (UCSC)CC2D2B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCC2D2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CC2D2B
dbVarCC2D2B
ClinVarCC2D2B
1000_GenomesCC2D2B 
Exome Variant ServerCC2D2B
ExAC (Exome Aggregation Consortium)CC2D2B (select the gene name)
Genetic variants : HAPMAP387707
Genomic Variants (DGV)CC2D2B [DGVbeta]
DECIPHER (Syndromes)10:97759848-97792441  ENSG00000188649
CONAN: Copy Number AnalysisCC2D2B 
Mutations
ICGC Data PortalCC2D2B 
TCGA Data PortalCC2D2B 
Broad Tumor PortalCC2D2B
OASIS PortalCC2D2B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCC2D2B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCC2D2B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CC2D2B
DgiDB (Drug Gene Interaction Database)CC2D2B
DoCM (Curated mutations)CC2D2B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CC2D2B (select a term)
intoGenCC2D2B
Cancer3DCC2D2B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCC2D2B
Genetic Testing Registry CC2D2B
NextProtQ6DHV5 [Medical]
TSGene387707
GENETestsCC2D2B
Huge Navigator CC2D2B [HugePedia]
snp3D : Map Gene to Disease387707
BioCentury BCIQCC2D2B
ClinGenCC2D2B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD387707
Chemical/Pharm GKB GenePA162381273
Clinical trialCC2D2B
Miscellaneous
canSAR (ICR)CC2D2B (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCC2D2B
EVEXCC2D2B
GoPubMedCC2D2B
iHOPCC2D2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:58:16 CET 2017

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