Atlas of Genetics and Cytogenetics in Oncology and Haematology

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CCDC110 (coiled-coil domain containing 110)

Identity

Other namesCT52
KM-HN-1
KMHN1
HGNC (Hugo) CCDC110
LocusID (NCBI) 256309
Location 4q35.1
Location_base_pair Starts at 186366338 and ends at 186392913 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CCDC110   28504
Entrez_Gene (NCBI)CCDC110  256309  coiled-coil domain containing 110
Cards
GeneCards (Weizmann)CCDC110
Ensembl (Hinxton)ENSG00000168491 [Gene_View]  chr4:186366338-186392913 [Contig_View]  CCDC110 [Vega]
AceView (NCBI)CCDC110
Genatlas (Paris)CCDC110
SOURCE (Stanford)NM_001145411 NM_152775
Genomic and cartography
GoldenPath (UCSC)CCDC110  -  4q35.1   chr4:186366338-186392913 -  4q35.1   [Description]    (hg19-Feb_2009)
EnsemblCCDC110 - 4q35.1 [CytoView]
Mapping of homologs : NCBICCDC110 [Mapview]
OMIM609488   
Gene and transcription
Genbank (Entrez)AB080722 AI949455 AK097605 AK302815 AL833337
RefSeq transcript (SRS)NM_001145411 NM_152775
RefSeq transcript (Entrez)NM_001145411 NM_152775
RefSeq genomic (SRS)AC_000136 NC_000004 NC_018915 NT_016354 NW_001838921 NW_004078021
RefSeq genomic (Entrez)AC_000136 NC_000004 NC_018915 NT_016354 NW_001838921 NW_004078021
Consensus coding sequences : CCDS (NCBI)CCDC110
Cluster EST : UnigeneHs.41101 [ SRS ] Hs.41101 [ NCBI ]
CGAP (NCI)Hs.41101
Alternative Splicing : Fast-db (Paris)GSHG0023696
Alternative Splicing GalleryENSG00000168491
Gene ExpressionCCDC110 [ NCBI-GEO ]   CCDC110 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TBZ0 (SRS) Q8TBZ0 (Uniprot)
NextProtQ8TBZ0
With graphics : InterProQ8TBZ0
Splice isoforms : SwissVarQ8TBZ0(Swissvar)
Related proteins : CluSTrQ8TBZ0
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM256309
Blocks (Seattle)Q8TBZ0
Human Protein AtlasENSG00000168491
HPRD11335
IPIIPI00152318   IPI00784583   IPI00966653   IPI00965968   IPI00966886   IPI00966553   IPI00966274   
Protein Interaction databases
DIP (DOE-UCLA)Q8TBZ0
IntAct (EBI)Q8TBZ0
FunCoupENSG00000168491
REACTOMECCDC110
Protein Interaction Database256309
BioGRIDCCDC110
InParanoidQ8TBZ0
Interologous Interaction database Q8TBZ0
IntegromeDBCCDC110
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CCDC110
SNP (GeneSNP Utah)CCDC110
SNP : HGBaseCCDC110
Genetic variants : HAPMAPCCDC110
Somatic Mutations in Cancer : COSMICCCDC110 
CONAN: Copy Number AnalysisCCDC110 
Mutations and Diseases : HGMDCCDC110
OMIM609488   
GENETests609488   
Disease Genetic AssociationCCDC110
Huge Navigator CCDC110 [HugePedia]  CCDC110 [HugeCancerGEM]
Genomic VariantsCCDC110  CCDC110 [DGVbeta]
snp3D : Map Gene to Disease256309
General knowledge
Homologs : HomoloGeneCCDC110
Homology/Alignments : Family Browser (UCSC)CCDC110
Phylogenetic Trees/Animal Genes : TreeFamCCDC110
Chemical/Protein Interactions : CTD256309
Chemical/Pharm GKB GenePA162381283
Clinical trialCCDC110
Cancer Resource (Charite)ENSG00000168491
Ontology : AmiGOnucleus  nucleolus  cytoplasm  Golgi apparatus  plasma membrane  intracellular membrane-bounded organelle  
Ontology : EGO-EBInucleus  nucleolus  cytoplasm  Golgi apparatus  plasma membrane  intracellular membrane-bounded organelle  
Other databases
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
PubGeneCCDC110
iHOPCCDC110
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:26:58 CEST 2013
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