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CCDC114 (coiled-coil domain containing 114)

Identity

Alias_symbol (synonym)FLJ32926
CILD20
Other alias
HGNC (Hugo) CCDC114
LocusID (NCBI) 93233
Atlas_Id 61470
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 48296452 and ends at 48320075 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC114   26560
Cards
Entrez_Gene (NCBI)CCDC114  93233  coiled-coil domain containing 114
AliasesCILD20
GeneCards (Weizmann)CCDC114
Ensembl hg19 (Hinxton)ENSG00000105479 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000105479 [Gene_View]  chr19:48296452-48320075 [Contig_View]  CCDC114 [Vega]
ICGC DataPortalENSG00000105479
TCGA cBioPortalCCDC114
AceView (NCBI)CCDC114
Genatlas (Paris)CCDC114
WikiGenes93233
SOURCE (Princeton)CCDC114
Genetics Home Reference (NIH)CCDC114
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC114  -     chr19:48296452-48320075 -  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC114  -     19q13.33   [Description]    (hg19-Feb_2009)
EnsemblCCDC114 - 19q13.33 [CytoView hg19]  CCDC114 - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBICCDC114 [Mapview hg19]  CCDC114 [Mapview hg38]
OMIM615038   615067   
Gene and transcription
Genbank (Entrez)AK057357 AK057488 AK128144 AL122083 BC007730
RefSeq transcript (Entrez)NM_001135193 NM_001135194 NM_144577
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC114
Cluster EST : UnigeneHs.112645 [ NCBI ]
CGAP (NCI)Hs.112645
Alternative Splicing GalleryENSG00000105479
Gene ExpressionCCDC114 [ NCBI-GEO ]   CCDC114 [ EBI - ARRAY_EXPRESS ]   CCDC114 [ SEEK ]   CCDC114 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC114 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93233
GTEX Portal (Tissue expression)CCDC114
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96M63   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96M63  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96M63
Splice isoforms : SwissVarQ96M63
PhosPhoSitePlusQ96M63
Domains : Interpro (EBI)ODA1/DCC2_fam   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC114
DMDM Disease mutations93233
Blocks (Seattle)CCDC114
SuperfamilyQ96M63
Human Protein AtlasENSG00000105479
Peptide AtlasQ96M63
HPRD08149
IPIIPI00847386   IPI00065153   IPI00791357   
Protein Interaction databases
DIP (DOE-UCLA)Q96M63
IntAct (EBI)Q96M63
FunCoupENSG00000105479
BioGRIDCCDC114
STRING (EMBL)CCDC114
ZODIACCCDC114
Ontologies - Pathways
QuickGOQ96M63
Ontology : AmiGOcilium movement  protein binding  cilium  axoneme  outer dynein arm  outer dynein arm assembly  
Ontology : EGO-EBIcilium movement  protein binding  cilium  axoneme  outer dynein arm  outer dynein arm assembly  
NDEx NetworkCCDC114
Atlas of Cancer Signalling NetworkCCDC114
Wikipedia pathwaysCCDC114
Orthology - Evolution
OrthoDB93233
GeneTree (enSembl)ENSG00000105479
Phylogenetic Trees/Animal Genes : TreeFamCCDC114
HOVERGENQ96M63
HOGENOMQ96M63
Homologs : HomoloGeneCCDC114
Homology/Alignments : Family Browser (UCSC)CCDC114
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC114 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC114
dbVarCCDC114
ClinVarCCDC114
1000_GenomesCCDC114 
Exome Variant ServerCCDC114
ExAC (Exome Aggregation Consortium)CCDC114 (select the gene name)
Genetic variants : HAPMAP93233
Genomic Variants (DGV)CCDC114 [DGVbeta]
DECIPHERCCDC114 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC114 
Mutations
ICGC Data PortalCCDC114 
TCGA Data PortalCCDC114 
Broad Tumor PortalCCDC114
OASIS PortalCCDC114 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC114  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCDC114
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCDC114
DgiDB (Drug Gene Interaction Database)CCDC114
DoCM (Curated mutations)CCDC114 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC114 (select a term)
intoGenCCDC114
Cancer3DCCDC114(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615038    615067   
Orphanet665   
MedgenCCDC114
Genetic Testing Registry CCDC114
NextProtQ96M63 [Medical]
TSGene93233
GENETestsCCDC114
Target ValidationCCDC114
Huge Navigator CCDC114 [HugePedia]
snp3D : Map Gene to Disease93233
BioCentury BCIQCCDC114
ClinGenCCDC114
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93233
Chemical/Pharm GKB GenePA145149267
Clinical trialCCDC114
Miscellaneous
canSAR (ICR)CCDC114 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC114
EVEXCCDC114
GoPubMedCCDC114
iHOPCCDC114
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:04:01 CEST 2017

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