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CCDC124 (coiled-coil domain containing 124)

Identity

Other alias-
HGNC (Hugo) CCDC124
LocusID (NCBI) 115098
Atlas_Id 61476
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 17933015 and ends at 17943985 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KDM5C (Xp11.22) / CCDC124 (19p13.11)SAA2-SAA4 (11p15.1) / CCDC124 (19p13.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC124   25171
Cards
Entrez_Gene (NCBI)CCDC124  115098  coiled-coil domain containing 124
Aliases
GeneCards (Weizmann)CCDC124
Ensembl hg19 (Hinxton)ENSG00000007080 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000007080 [Gene_View]  chr19:17933015-17943985 [Contig_View]  CCDC124 [Vega]
ICGC DataPortalENSG00000007080
TCGA cBioPortalCCDC124
AceView (NCBI)CCDC124
Genatlas (Paris)CCDC124
WikiGenes115098
SOURCE (Princeton)CCDC124
Genetics Home Reference (NIH)CCDC124
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC124  -     chr19:17933015-17943985 +  19p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC124  -     19p13.11   [Description]    (hg19-Feb_2009)
EnsemblCCDC124 - 19p13.11 [CytoView hg19]  CCDC124 - 19p13.11 [CytoView hg38]
Mapping of homologs : NCBICCDC124 [Mapview hg19]  CCDC124 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF086307 BC013949 BG829184 BM998230 BP309483
RefSeq transcript (Entrez)NM_001136203 NM_138442
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC124
Cluster EST : UnigeneHs.100043 [ NCBI ]
CGAP (NCI)Hs.100043
Alternative Splicing GalleryENSG00000007080
Gene ExpressionCCDC124 [ NCBI-GEO ]   CCDC124 [ EBI - ARRAY_EXPRESS ]   CCDC124 [ SEEK ]   CCDC124 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC124 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)115098
GTEX Portal (Tissue expression)CCDC124
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96CT7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96CT7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96CT7
Splice isoforms : SwissVarQ96CT7
PhosPhoSitePlusQ96CT7
Domains : Interpro (EBI)Ccdc124    HMG_box_dom   
Domain families : Pfam (Sanger)DUF1014 (PF06244)   
Domain families : Pfam (NCBI)pfam06244   
Conserved Domain (NCBI)CCDC124
DMDM Disease mutations115098
Blocks (Seattle)CCDC124
SuperfamilyQ96CT7
Human Protein AtlasENSG00000007080
Peptide AtlasQ96CT7
HPRD14008
IPIIPI00060627   
Protein Interaction databases
DIP (DOE-UCLA)Q96CT7
IntAct (EBI)Q96CT7
FunCoupENSG00000007080
BioGRIDCCDC124
STRING (EMBL)CCDC124
ZODIACCCDC124
Ontologies - Pathways
QuickGOQ96CT7
Ontology : AmiGORNA binding  cytoplasm  microtubule organizing center  cell cycle  midbody  cell division  
Ontology : EGO-EBIRNA binding  cytoplasm  microtubule organizing center  cell cycle  midbody  cell division  
NDEx NetworkCCDC124
Atlas of Cancer Signalling NetworkCCDC124
Wikipedia pathwaysCCDC124
Orthology - Evolution
OrthoDB115098
GeneTree (enSembl)ENSG00000007080
Phylogenetic Trees/Animal Genes : TreeFamCCDC124
HOVERGENQ96CT7
HOGENOMQ96CT7
Homologs : HomoloGeneCCDC124
Homology/Alignments : Family Browser (UCSC)CCDC124
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC124 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC124
dbVarCCDC124
ClinVarCCDC124
1000_GenomesCCDC124 
Exome Variant ServerCCDC124
ExAC (Exome Aggregation Consortium)CCDC124 (select the gene name)
Genetic variants : HAPMAP115098
Genomic Variants (DGV)CCDC124 [DGVbeta]
DECIPHERCCDC124 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC124 
Mutations
ICGC Data PortalCCDC124 
TCGA Data PortalCCDC124 
Broad Tumor PortalCCDC124
OASIS PortalCCDC124 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC124  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCDC124
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCDC124
DgiDB (Drug Gene Interaction Database)CCDC124
DoCM (Curated mutations)CCDC124 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC124 (select a term)
intoGenCCDC124
Cancer3DCCDC124(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCDC124
Genetic Testing Registry CCDC124
NextProtQ96CT7 [Medical]
TSGene115098
GENETestsCCDC124
Target ValidationCCDC124
Huge Navigator CCDC124 [HugePedia]
snp3D : Map Gene to Disease115098
BioCentury BCIQCCDC124
ClinGenCCDC124
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD115098
Chemical/Pharm GKB GenePA147358292
Clinical trialCCDC124
Miscellaneous
canSAR (ICR)CCDC124 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC124
EVEXCCDC124
GoPubMedCCDC124
iHOPCCDC124
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:42:21 CEST 2017

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